RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 ZKSCAN4Q969J2 545 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SAAL1Q96ER3 474 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 NT5C1BQ96P26 610 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 POP1Q99575 1024 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 MTFR1LQ9H019 292 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CDC42EP4Q9H3Q1 356 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 AAASQ9NRG9 546 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ATP2C2O75185 946 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 DLATP10515 647 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CNGA2Q16280 664 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TBC1D10BQ4KMP7 808 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SGO2Q562F6 1265 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 EXOC3L1Q86VI1 746 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CCDC25Q86WR0 208 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 MCF2L2Q86YR7 1114 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CNKSR1Q969H4 720 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 RAB20Q9NX57 234 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SAMD15Q9P1V8 674 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CHRNA5P30532 468 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 GSCP56915 257 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 KRT17Q04695 432 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 FAM102BQ5T8I3 360 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 RHBDF2Q6PJF5 856 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CDAN1Q8IWY9 1227 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TMC2Q8TDI7 906 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 C1orf54Q8WWF1 131 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 FBXL18Q96ME1 805 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 QTRT2Q9H974 415 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 BRWD3Q6RI45 1802 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ITIH2P19823 946 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 NPTX2P47972 431 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 PSMC5P62195 406 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 DLGAP5Q15398 846 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SNCBQ16143 134 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CLEC16AQ2KHT3 1053 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SPDYE2Q495Y8 402 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 XKR9Q5GH70 373 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CCDC50Q8IVM0 306 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 DHX38Q92620 1227 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 MFSD14AQ96MC6 490 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SERPINB12Q96P63 405 aa15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 DDX23Q9BUQ8 820 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-237ENST00000585163 GSTA1P08263 222 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 VIMP08670 466 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 IVDP26440 423 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 GTF2H1P32780 548 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 LONRF1Q17RB8 773 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CCDC38Q502W7 563 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 RSBN1LQ6PCB5 846 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TRMT1LQ7Z2T5 733 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SUPT20HQ8NEM7 779 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 NCAPGQ9BPX3 1015 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ELAC2Q9BQ52 826 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CCDC113Q9H0I3 377 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TOPORSQ9NS56 1045 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 HOMER3Q9NSC5 361 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ANKEF1Q9NU02 776 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ANAPC7Q9UJX3 599 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SLC12A4Q9UP95 1085 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 PSME4Q14997 1843 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 MAPK4P31152 587 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 IFNAR2P48551 515 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 DMP1Q13316 513 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 LLGL1Q15334 1064 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 PLA2G4FQ68DD2 849 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SYDE1Q6ZW31 735 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SV2AQ7L0J3 742 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SYTL5Q8TDW5 730 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 KIFC3Q9BVG8 833 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TMEM39BQ9GZU3 492 aa15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 NSRP1Q9H0G5 558 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.17■□□□□ 0.02
CDK5RAP3-237ENST00000585163 DENND3A2RUS2 1198 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ACSL3O95573 720 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 UNGP13051 313 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 MAN1A1P33908 653 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 JAK3P52333 1124 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 GCNT1Q02742 428 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SNX1Q13596 522 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SLC39A4Q6P5W5 647 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 USP37Q86T82 979 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 FAM228AQ86W67 206 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 MAGEC3Q8TD91 643 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SNF8Q96H20 258 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CHST7Q9NS84 486 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ASIC3Q9UHC3 531 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 WDR64B1ANS9 1081 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 MGRN1O60291 552 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ATP9AO75110 1047 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CCNE2O96020 404 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ASNSP08243 561 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SCP2P22307 547 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SFNP31947 248 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 RDXP35241 583 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CYP24A1Q07973 514 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 PTK6Q13882 451 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 FKBP1CQ5VVH2 108 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ENOSF1Q7L5Y1 443 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TRPM8Q7Z2W7 1104 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms