RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 UROC1Q96N76 676 aa13.56□□□□□ -0.24
SS18-225ENST00000585121 GPR62Q9BZJ7 368 aa13.56□□□□□ -0.24
SS18-225ENST00000585121 ZHX3Q9H4I2 956 aa13.56□□□□□ -0.24
SS18-225ENST00000585121 PARVGQ9HBI0 331 aa13.56□□□□□ -0.24
SS18-225ENST00000585121 RXFP1Q9HBX9 757 aa13.56□□□□□ -0.24
SS18-225ENST00000585121 CHST7Q9NS84 486 aa13.56□□□□□ -0.24
SS18-225ENST00000585121 SLC38A7Q9NVC3 462 aa13.56□□□□□ -0.24
SS18-225ENST00000585121 ANKFY1Q9P2R3 1169 aa13.56□□□□□ -0.24
SS18-225ENST00000585121 TEX28O15482 410 aa13.55□□□□□ -0.24
SS18-225ENST00000585121 CLDN3O15551 220 aa13.55□□□□□ -0.24
SS18-225ENST00000585121 HARSP12081 509 aaKnown RBP13.55□□□□□ -0.24
SS18-225ENST00000585121 COL9A1P20849 921 aa13.55□□□□□ -0.24
SS18-225ENST00000585121 NOLC1Q14978 699 aaKnown RBP eCLIP13.55□□□□□ -0.24
SS18-225ENST00000585121 RRAGBQ5VZM2 374 aa13.55□□□□□ -0.24
SS18-225ENST00000585121 FAM173BQ6P4H8 233 aa13.55□□□□□ -0.24
SS18-225ENST00000585121 PDXDC1Q6P996 788 aa13.55□□□□□ -0.24
SS18-225ENST00000585121 ZPBP2Q6X784 338 aa13.55□□□□□ -0.24
SS18-225ENST00000585121 HAUS6Q7Z4H7 955 aa13.55□□□□□ -0.24
SS18-225ENST00000585121 CEP57Q86XR8 500 aa13.55□□□□□ -0.24
SS18-225ENST00000585121 C12orf76Q8N812 135 aaPredicted RBP13.55□□□□□ -0.24
SS18-225ENST00000585121 KRI1Q8N9T8 703 aaKnown RBP13.55□□□□□ -0.24
SS18-225ENST00000585121 ZNF396Q96N95 335 aaPredicted RBP13.55□□□□□ -0.24
SS18-225ENST00000585121 REEP2Q9BRK0 252 aa13.55□□□□□ -0.24
SS18-225ENST00000585121 LRFN3Q9BTN0 628 aa13.55□□□□□ -0.24
SS18-225ENST00000585121 TTPALQ9BTX7 342 aa13.55□□□□□ -0.24
SS18-225ENST00000585121 BLOC1S4Q9NUP1 217 aa13.55□□□□□ -0.24
SS18-225ENST00000585121 FNIP2Q9P278 1114 aa13.55□□□□□ -0.24
SS18-225ENST00000585121 SMIM28A0A1B0GU29 152 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 FAM86C2PA6NEL3 165 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 TRAPPC3O43617 180 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 BRD1O95696 1058 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 EFEMP2O95967 443 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 C1RP00736 705 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 PROZP22891 400 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 NCKAP1LP55160 1127 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 STK38Q15208 465 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 HERC4Q5GLZ8 1057 aaPredicted RBP13.54□□□□□ -0.24
SS18-225ENST00000585121 GLRA4Q5JXX5 417 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 SPECC1Q5M775 1068 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 FAM171A1Q5VUB5 890 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 DCLRE1AQ6PJP8 1040 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 TMC5Q6UXY8 1006 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 HASPINQ8TF76 798 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 HDAC7Q8WUI4 952 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 DDX27Q96GQ7 796 aaKnown RBP13.54□□□□□ -0.24
SS18-225ENST00000585121 EPSTI1Q96J88 318 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 PPP1R10Q96QC0 940 aaKnown RBP13.54□□□□□ -0.24
SS18-225ENST00000585121 PAAF1Q9BRP4 392 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 STK17AQ9UEE5 414 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 MUTYHQ9UIF7 546 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 FBXO2Q9UK22 296 aaPredicted RBP13.54□□□□□ -0.24
SS18-225ENST00000585121 C5orf42Q9H799 3197 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 K7ENM7 598 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 TRAK2O60296 914 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 B3GAT3O94766 335 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 KIF4AO95239 1232 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 LIG4P49917 911 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 SLC39A14Q15043 492 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 NAB2Q15742 525 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 KYAT1Q16773 422 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 CCDC73Q6ZRK6 1079 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 SV2BQ7L1I2 683 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 CEP120Q8N960 986 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 ZBTB45Q96K62 511 aaPredicted RBP13.54□□□□□ -0.24
SS18-225ENST00000585121 B3GALT6Q96L58 329 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 CLIC6Q96NY7 704 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 USP28Q96RU2 1077 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 PLEKHA4Q9H4M7 779 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 POMKQ9H5K3 350 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 MAN1C1Q9NR34 630 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 CACNG4Q9UBN1 327 aa13.54□□□□□ -0.24
SS18-225ENST00000585121 MORC2Q9Y6X9 1032 aaPredicted RBP13.54□□□□□ -0.24
SS18-225ENST00000585121 PRR33A8MZF0 331 aa13.53□□□□□ -0.24
SS18-225ENST00000585121 TMEM189-UBE2V1I3L0A0 370 aa13.53□□□□□ -0.24
SS18-225ENST00000585121 HNRNPDLO14979 420 aaKnown RBP13.53□□□□□ -0.24
SS18-225ENST00000585121 WEE2P0C1S8 567 aa13.53□□□□□ -0.24
SS18-225ENST00000585121 ZNF131P52739 623 aa13.53□□□□□ -0.24
SS18-225ENST00000585121 MCL1Q07820 350 aa13.53□□□□□ -0.24
SS18-225ENST00000585121 ALKAL1Q6UXT8 129 aa13.53□□□□□ -0.24
SS18-225ENST00000585121 CYP26C1Q6V0L0 522 aa13.53□□□□□ -0.24
SS18-225ENST00000585121 C15orf39Q6ZRI6 1047 aa13.53□□□□□ -0.24
SS18-225ENST00000585121 GPR149Q86SP6 731 aa13.53□□□□□ -0.24
SS18-225ENST00000585121 PALB2Q86YC2 1186 aa13.53□□□□□ -0.24
SS18-225ENST00000585121 PIK3R5Q8WYR1 880 aa13.53□□□□□ -0.24
SS18-225ENST00000585121 SNX27Q96L92 541 aa13.53□□□□□ -0.24
SS18-225ENST00000585121 CXCL16Q9H2A7 254 aa13.53□□□□□ -0.24
SS18-225ENST00000585121 TBX20Q9UMR3 447 aa13.53□□□□□ -0.24
SS18-225ENST00000585121 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.53□□□□□ -0.24
SS18-225ENST00000585121 TDRD15B5MCY1 1934 aaKnown RBP13.52□□□□□ -0.24
SS18-225ENST00000585121 ABLIM1O14639 778 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 CLTAP09496 248 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 KCNE1P15382 129 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 SP100P23497 879 aaPredicted RBP13.52□□□□□ -0.25
SS18-225ENST00000585121 CLCNKBP51801 687 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 PSMD5Q16401 504 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 UPP1Q16831 310 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 XKR4Q5GH76 650 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 RTP2Q5QGT7 225 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 KANK3Q6NY19 840 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms