RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 USP28Q96RU2 1077 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 PAAF1Q9BRP4 392 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 RHOBTB2Q9BYZ6 727 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 GPR62Q9BZJ7 368 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 CXCL16Q9H2A7 254 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 PARVGQ9HBI0 331 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 C11orf16Q9NQ32 467 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 FNIP2Q9P278 1114 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 VWA8A3KMH1 1905 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 NPHP3-ACAD11A0A0J9YXS1 232 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 CASTOR2A6NHX0 329 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 TEX28O15482 410 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 PIGRP01833 764 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 KCNE1P15382 129 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 KLRC2P26717 231 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 MARCKSP29966 332 aaPredicted RBP14.41□□□□□ -0.1
ERBB2-220ENST00000584684 DDIT3P35638 169 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 TXLNAP40222 546 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 MTHFRP42898 656 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 MCL1Q07820 350 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 ELAVL2Q12926 359 aaKnown RBP14.41□□□□□ -0.1
ERBB2-220ENST00000584684 MCM6Q14566 821 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 ELMSAN1Q6PJG2 1045 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 USP49Q70CQ1 688 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 HAUS6Q7Z4H7 955 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 RNF135Q8IUD6 432 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 CEP120Q8N960 986 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 CMASQ8NFW8 434 aaPredicted RBP14.41□□□□□ -0.1
ERBB2-220ENST00000584684 HDAC7Q8WUI4 952 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 RIPOR3Q96MK2 946 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 SLC38A7Q9NVC3 462 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 CNTN3Q9P232 1028 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 CCDC39Q9UFE4 941 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 DPP7Q9UHL4 492 aa14.41□□□□□ -0.1
ERBB2-220ENST00000584684 SMIM28A0A1B0GU29 152 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 C2CD2LO14523 706 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 TBCAO75347 108 aaKnown RBP14.4□□□□□ -0.1
ERBB2-220ENST00000584684 TADA2AO75478 443 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 FAM13AO94988 1023 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 GLUD1P00367 558 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 CACNB1Q02641 598 aaPredicted RBP14.4□□□□□ -0.1
ERBB2-220ENST00000584684 TMEM31Q5JXX7 168 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 PDXDC1Q6P996 788 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 C15orf39Q6ZRI6 1047 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 KRI1Q8N9T8 703 aaKnown RBP14.4□□□□□ -0.1
ERBB2-220ENST00000584684 PIK3R5Q8WYR1 880 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 ACAP3Q96P50 834 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 FIZ1Q96SL8 496 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 ST6GALNAC4Q9H4F1 302 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 ANKFY1Q9P2R3 1169 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 CACNG4Q9UBN1 327 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.4□□□□□ -0.1
ERBB2-220ENST00000584684 MTCL1Q9Y4B5 1905 aaKnown RBP14.4□□□□□ -0.1
ERBB2-220ENST00000584684 C2orf16Q68DN1 1984 aa14.4□□□□□ -0.1
ERBB2-220ENST00000584684 K7ENM7 598 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 CLDN3O15551 220 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 TRAK2O60296 914 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 KRT18P05783 430 aaKnown RBP14.39□□□□□ -0.11
ERBB2-220ENST00000584684 KYAT1Q16773 422 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 UPP1Q16831 310 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 GLRA4Q5JXX5 417 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 RTP2Q5QGT7 225 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 RARS2Q5T160 578 aaKnown RBP14.39□□□□□ -0.11
ERBB2-220ENST00000584684 DCLRE1AQ6PJP8 1040 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 CYP26C1Q6V0L0 522 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.39□□□□□ -0.11
ERBB2-220ENST00000584684 GPR149Q86SP6 731 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 MAP4K3Q8IVH8 894 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 LINC00301Q8NCQ3 95 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 RABGGTAQ92696 567 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 DDX27Q96GQ7 796 aaKnown RBP14.39□□□□□ -0.11
ERBB2-220ENST00000584684 CLIC6Q96NY7 704 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 TCHPQ9BT92 498 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 TTPALQ9BTX7 342 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 POMKQ9H5K3 350 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 TBX20Q9UMR3 447 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 NR2E1Q9Y466 385 aa14.39□□□□□ -0.11
ERBB2-220ENST00000584684 PRR33A8MZF0 331 aa14.38□□□□□ -0.11
ERBB2-220ENST00000584684 HNRNPDLO14979 420 aaKnown RBP14.38□□□□□ -0.11
ERBB2-220ENST00000584684 MEFVO15553 781 aaPredicted RBP14.38□□□□□ -0.11
ERBB2-220ENST00000584684 FAM189A1O60320 539 aa14.38□□□□□ -0.11
ERBB2-220ENST00000584684 PPP6R2O75170 966 aa14.38□□□□□ -0.11
ERBB2-220ENST00000584684 YEATS4O95619 227 aa14.38□□□□□ -0.11
ERBB2-220ENST00000584684 CLTAP09496 248 aa14.38□□□□□ -0.11
ERBB2-220ENST00000584684 FGFR3P22607 806 aa14.38□□□□□ -0.11
ERBB2-220ENST00000584684 GTF2BQ00403 316 aa14.38□□□□□ -0.11
ERBB2-220ENST00000584684 CEBPZQ03701 1054 aaKnown RBP14.38□□□□□ -0.11
ERBB2-220ENST00000584684 SOX4Q06945 474 aaPredicted RBP14.38□□□□□ -0.11
ERBB2-220ENST00000584684 DHX8Q14562 1220 aaKnown RBP14.38□□□□□ -0.11
ERBB2-220ENST00000584684 SPECC1Q5M775 1068 aa14.38□□□□□ -0.11
ERBB2-220ENST00000584684 CCDC73Q6ZRK6 1079 aa14.38□□□□□ -0.11
ERBB2-220ENST00000584684 ZBTB33Q86T24 672 aa14.38□□□□□ -0.11
ERBB2-220ENST00000584684 MYCT1Q8N699 235 aa14.38□□□□□ -0.11
ERBB2-220ENST00000584684 RIN2Q8WYP3 895 aaPredicted RBP14.38□□□□□ -0.11
ERBB2-220ENST00000584684 ZBTB45Q96K62 511 aaPredicted RBP14.38□□□□□ -0.11
ERBB2-220ENST00000584684 RPGRIP1Q96KN7 1286 aa14.38□□□□□ -0.11
ERBB2-220ENST00000584684 B3GALT6Q96L58 329 aa14.38□□□□□ -0.11
ERBB2-220ENST00000584684 ZNF396Q96N95 335 aaPredicted RBP14.38□□□□□ -0.11
ERBB2-220ENST00000584684 LRFN3Q9BTN0 628 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms