RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 NCOA4Q13772 614 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 ZCWPW2Q504Y3 356 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 C6orf118Q5T5N4 469 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.72□□□□□ -0.37
ERBB2-218ENST00000584450 DPP9Q86TI2 863 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 ANKMY2Q8IV38 441 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 P2RX7Q99572 595 aaKnown RBP12.72□□□□□ -0.37
ERBB2-218ENST00000584450 JPH2Q9BR39 696 aaPredicted RBP12.72□□□□□ -0.37
ERBB2-218ENST00000584450 SEMA4AQ9H3S1 761 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 SEPT10Q9P0V9 454 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 AJAP1Q9UKB5 411 aaPredicted RBP12.72□□□□□ -0.37
ERBB2-218ENST00000584450 DUOX1Q9NRD9 1551 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 NUP98P52948 1817 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 IGKV6D-41A0A0C4DH26 115 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 FRMD3A2A2Y4 597 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 GOLGA8RI6L899 631 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 CAND2O75155 1236 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 RALAP11233 206 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 CIITAP33076 1130 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 CLK2P49760 499 aaKnown RBP12.72□□□□□ -0.37
ERBB2-218ENST00000584450 EIF3BP55884 814 aaKnown RBP12.72□□□□□ -0.37
ERBB2-218ENST00000584450 PPATQ06203 517 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 UGCGQ16739 394 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 XKR3Q5GH77 459 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 CYP4A22Q5TCH4 519 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 ZC3H18Q86VM9 953 aaKnown RBP12.72□□□□□ -0.37
ERBB2-218ENST00000584450 RBBP8NLQ8NC74 664 aaPredicted RBP12.72□□□□□ -0.37
ERBB2-218ENST00000584450 PRMT1Q99873 361 aaKnown RBP12.72□□□□□ -0.37
ERBB2-218ENST00000584450 ADPGKQ9BRR6 497 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 PSD3Q9NYI0 1048 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 PCDHGC5Q9Y5F6 944 aa12.72□□□□□ -0.37
ERBB2-218ENST00000584450 CYP3A7-CYP3A51PA0A087WV96 503 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 RASA4BC9J798 803 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 RASA4O43374 803 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 PYGMP11217 842 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 CHN1P15882 459 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 CYP3A7P24462 503 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 ATP11AP98196 1134 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 TMEM62Q0P6H9 643 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 NAA25Q14CX7 972 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 PGM5Q15124 567 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 ZNF667Q5HYK9 610 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 IZUMO3Q5VZ72 239 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 SLFN12LQ6IEE8 588 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 TRIM50Q86XT4 487 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 SIAH1Q8IUQ4 282 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 TMEM35BQ8NCS4 154 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 EPS8L3Q8TE67 593 aaKnown RBP12.71□□□□□ -0.37
ERBB2-218ENST00000584450 CARD9Q9H257 536 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 RPF1Q9H9Y2 349 aaKnown RBP12.71□□□□□ -0.37
ERBB2-218ENST00000584450 TMEM8AQ9HCN3 771 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 TTMPQ5BVD1 217 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 CROCCP2Q86T23 111 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 NOP9Q86U38 636 aaKnown RBP12.71□□□□□ -0.37
ERBB2-218ENST00000584450 GINM1Q9NU53 330 aa12.71□□□□□ -0.37
ERBB2-218ENST00000584450 LRP6O75581 1613 aa12.71□□□□□ -0.38
ERBB2-218ENST00000584450 MYO5AQ9Y4I1 1855 aaKnown RBP12.71□□□□□ -0.38
ERBB2-218ENST00000584450 SRCAPQ6ZRS2 3230 aa12.71□□□□□ -0.38
ERBB2-218ENST00000584450 ASTN2O75129 1339 aaPredicted RBP12.71□□□□□ -0.38
ERBB2-218ENST00000584450 PHF2O75151 1096 aa12.71□□□□□ -0.38
ERBB2-218ENST00000584450 BRD2P25440 801 aaKnown RBP12.71□□□□□ -0.38
ERBB2-218ENST00000584450 PPP2R5CQ13362 524 aa12.71□□□□□ -0.38
ERBB2-218ENST00000584450 ZNF449Q6P9G9 518 aa12.71□□□□□ -0.38
ERBB2-218ENST00000584450 DARS2Q6PI48 645 aaKnown RBP12.71□□□□□ -0.38
ERBB2-218ENST00000584450 ATP8B4Q8TF62 1192 aa12.71□□□□□ -0.38
ERBB2-218ENST00000584450 RNF34Q969K3 372 aa12.71□□□□□ -0.38
ERBB2-218ENST00000584450 TRIM11Q96F44 468 aa12.71□□□□□ -0.38
ERBB2-218ENST00000584450 SPATA33Q96N06 139 aa12.71□□□□□ -0.38
ERBB2-218ENST00000584450 MCEEQ96PE7 176 aa12.71□□□□□ -0.38
ERBB2-218ENST00000584450 KCND2Q9NZV8 630 aa12.71□□□□□ -0.38
ERBB2-218ENST00000584450 WRAP73Q9P2S5 460 aaPredicted RBP12.71□□□□□ -0.38
ERBB2-218ENST00000584450 FLT3P36888 993 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 PSMC1P62191 440 aaKnown RBP12.7□□□□□ -0.38
ERBB2-218ENST00000584450 NOP14P78316 857 aaKnown RBP12.7□□□□□ -0.38
ERBB2-218ENST00000584450 ADCY2Q08462 1091 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 MAPK7Q13164 816 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 ITGB3BPQ13352 177 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-218ENST00000584450 SLC13A5Q86YT5 568 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-218ENST00000584450 ZSWIM1Q9BR11 485 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 EPN3Q9H201 632 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 CYP26B1Q9NR63 512 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 PXMP2Q9NR77 195 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 HESX1Q9UBX0 185 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 NR2E1Q9Y466 385 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 FAM187AA6NFU0 413 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 FAM47CQ5HY64 1035 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 KCNT1Q5JUK3 1230 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 ZBED8Q8IZ13 594 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 PPP1R13LQ8WUF5 828 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 SMC6Q96SB8 1091 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 MIS12Q9H081 205 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 COL20A1Q9P218 1284 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 RIPK3Q9Y572 518 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 ABCC6O95255 1503 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 MYH8P13535 1937 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 ADRB2P07550 413 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 SAT1P21673 171 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 GTF2H1P32780 548 aa12.7□□□□□ -0.38
ERBB2-218ENST00000584450 ERFP50548 548 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms