RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	PBX3	P40426	434 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	SLC11A1	P49279	550 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	DSC1	Q08554	894 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	CCDC85B	Q15834	202 aa	Predicted RBP	10.79	□□□□□ -0.68
NARF-222	ENST00000583908	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	10.79	□□□□□ -0.68
NARF-222	ENST00000583908	PLPP4	Q5VZY2	271 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	ARMCX5	Q6P1M9	558 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	PDXDC1	Q6P996	788 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	KRBA2	Q6ZNG9	492 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	DDX53	Q86TM3	631 aa	Known RBP	10.79	□□□□□ -0.68
NARF-222	ENST00000583908	COLGALT2	Q8IYK4	626 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	HLA-C	Q95604	372 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	PAGE5	Q96GU1	130 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	IPO9	Q96P70	1041 aa	Known RBP	10.79	□□□□□ -0.68
NARF-222	ENST00000583908	GBP4	Q96PP9	640 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	FIZ1	Q96SL8	496 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	BLZF1	Q9H2G9	400 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	KIAA1586	Q9HCI6	787 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	CNTN3	Q9P232	1028 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	HCST	Q9UBK5	93 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	DNAJB4	Q9UDY4	337 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	AGO2	Q9UKV8	859 aa	Known RBP	10.79	□□□□□ -0.68
NARF-222	ENST00000583908	FAM50B	Q9Y247	325 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	USP20	Q9Y2K6	914 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	PRG3	Q9Y2Y8	225 aa	Predicted RBP	10.79	□□□□□ -0.68
NARF-222	ENST00000583908	KIAA1671	Q9BY89	1806 aa		10.79	□□□□□ -0.68
NARF-222	ENST00000583908	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	10.78	□□□□□ -0.68
NARF-222	ENST00000583908	GOLGA6L22	H0YM25	854 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	IL18RAP	O95256	599 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	MYB	P10242	640 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	KCNE1	P15382	129 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	PAX3	P23760	479 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	CUL4B	Q13620	913 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	TCEAL5	Q5H9L2	206 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	PPFIBP1	Q86W92	1011 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	ZNF280B	Q86YH2	543 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	VPS52	Q8N1B4	723 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	CEP120	Q8N960	986 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	BEST2	Q8NFU1	509 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	KIF12	Q96FN5	646 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	HERC2P3	Q9BVR0	1158 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
NARF-222	ENST00000583908	MRPL17	Q9NRX2	175 aa	Known RBP	10.78	□□□□□ -0.68
NARF-222	ENST00000583908	DPP7	Q9UHL4	492 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	ADAM28	Q9UKQ2	775 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	UBQLN1	Q9UMX0	589 aa	Known RBP	10.78	□□□□□ -0.68
NARF-222	ENST00000583908	DERA	Q9Y315	318 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.78	□□□□□ -0.68
NARF-222	ENST00000583908	STYXL1	Q9Y6J8	313 aa		10.78	□□□□□ -0.68
NARF-222	ENST00000583908	SMIM28	A0A1B0GU29	152 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	CASTOR2	A6NHX0	329 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	SPDYE4	A6NLX3	237 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	NT5C1B-RDH14	C9J2C7	533 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	TMEM189-UBE2V1	I3L0A0	370 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	ABLIM1	O14639	778 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	PTGES	O14684	152 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	B3GAT3	O94766	335 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	DDHD2	O94830	711 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	SOD2	P04179	222 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	RPN1	P04843	607 aa	Known RBP	10.77	□□□□□ -0.69
NARF-222	ENST00000583908	CXCL8	P10145	99 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	CTSA	P10619	480 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	CYP3A5	P20815	502 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	RPL9	P32969	192 aa	Known RBP	10.77	□□□□□ -0.69
NARF-222	ENST00000583908	GLUD2	P49448	558 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	NDUFV1	P49821	464 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	UBE2H	P62256	183 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	USP41	Q3LFD5	358 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	PUS10	Q3MIT2	529 aa	Known RBP	10.77	□□□□□ -0.69
NARF-222	ENST00000583908	GLRA4	Q5JXX5	417 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	FUT10	Q6P4F1	479 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	EP400NL	Q6ZTU2	488 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	USP37	Q86T82	979 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	NT5DC4	Q86YG4	428 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
NARF-222	ENST00000583908	NOC3L	Q8WTT2	800 aa	Known RBP	10.77	□□□□□ -0.69
NARF-222	ENST00000583908	ATXN2L	Q8WWM7	1075 aa	Known RBP	10.77	□□□□□ -0.69
NARF-222	ENST00000583908	PABPC5	Q96DU9	382 aa	Known RBP	10.77	□□□□□ -0.69
NARF-222	ENST00000583908	FAM212A	Q96EL1	285 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	CHAMP1	Q96JM3	812 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	ZBTB45	Q96K62	511 aa	Predicted RBP	10.77	□□□□□ -0.69
NARF-222	ENST00000583908	TIGD1	Q96MW7	591 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	PPP1R10	Q96QC0	940 aa	Known RBP	10.77	□□□□□ -0.69
NARF-222	ENST00000583908	STRA6	Q9BX79	667 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	ASB7	Q9H672	318 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	TLE6	Q9H808	572 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	NUB1	Q9Y5A7	615 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	MYO9B	Q13459	2157 aa		10.77	□□□□□ -0.69
NARF-222	ENST00000583908	RBAK-RBAKDN	I3L0D1	243 aa		10.76	□□□□□ -0.69
NARF-222	ENST00000583908	TULP1	O00294	542 aa	Predicted RBP	10.76	□□□□□ -0.69
NARF-222	ENST00000583908	FSCN2	O14926	492 aa		10.76	□□□□□ -0.69
NARF-222	ENST00000583908	EXTL3	O43909	919 aa		10.76	□□□□□ -0.69
NARF-222	ENST00000583908	PRPF6	O94906	941 aa	Known RBP	10.76	□□□□□ -0.69
NARF-222	ENST00000583908	ADH1A	P07327	375 aa		10.76	□□□□□ -0.69
NARF-222	ENST00000583908	PPP1R2	P41236	205 aa		10.76	□□□□□ -0.69
NARF-222	ENST00000583908	AFF1	P51825	1210 aa	Known RBP	10.76	□□□□□ -0.69
NARF-222	ENST00000583908	CASP5	P51878	434 aa		10.76	□□□□□ -0.69
NARF-222	ENST00000583908	MRPS5	P82675	430 aa	Known RBP	10.76	□□□□□ -0.69
NARF-222	ENST00000583908	STIM1	Q13586	685 aa		10.76	□□□□□ -0.69
NARF-222	ENST00000583908	KCNB1	Q14721	858 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms