RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 CPSF3Q9UKF6 684 aaKnown RBP11.91□□□□□ -0.5
TOP3A-216ENST00000583804 FAM189A1O60320 539 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 FGFR1OPO95684 399 aaKnown RBP11.9□□□□□ -0.5
TOP3A-216ENST00000583804 FGFR1P11362 822 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 ATF7P17544 494 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-216ENST00000583804 CASP4P49662 377 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 FANCCQ00597 558 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 HSP90AA2PQ14568 343 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-216ENST00000583804 SNRNP35Q16560 246 aaKnown RBP11.9□□□□□ -0.5
TOP3A-216ENST00000583804 NFIL3Q16649 462 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 GLB1LQ6UWU2 654 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 AGMOQ6ZNB7 445 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 LRRC55Q6ZSA7 311 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 ZNF598Q86UK7 904 aaKnown RBP11.9□□□□□ -0.5
TOP3A-216ENST00000583804 CBWD2Q8IUF1 395 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 ABI1Q8IZP0 508 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 TOP1MTQ969P6 601 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 GAD1Q99259 594 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 ZBED2Q9BTP6 218 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 TRIM5Q9C035 493 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 VPS16Q9H269 839 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 ELAC1Q9H777 363 aaKnown RBP11.9□□□□□ -0.5
TOP3A-216ENST00000583804 RSAD1Q9HA92 442 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 UBN1Q9NPG3 1134 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 TOPORSQ9NS56 1045 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-216ENST00000583804 RNF19AQ9NV58 838 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 RBAKQ9NYW8 714 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-216ENST00000583804 INPP5FQ9Y2H2 1132 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 CEP290O15078 2479 aa11.9□□□□□ -0.5
TOP3A-216ENST00000583804 AKAP3O75969 853 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 ADCY5O95622 1261 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 CXCL8P10145 99 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 PRKCSHP14314 528 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-216ENST00000583804 ATP2A2P16615 1042 aaKnown RBP11.89□□□□□ -0.51
TOP3A-216ENST00000583804 ZNF18P17022 549 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 PSMC2P35998 433 aaKnown RBP11.89□□□□□ -0.51
TOP3A-216ENST00000583804 MLH1P40692 756 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 MTIF2P46199 727 aaKnown RBP11.89□□□□□ -0.51
TOP3A-216ENST00000583804 ENOX2Q16206 610 aaKnown RBP11.89□□□□□ -0.51
TOP3A-216ENST00000583804 UVSSAQ2YD98 709 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 SLC10A6Q3KNW5 377 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 CDKAL1Q5VV42 579 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 FOXR2Q6PJQ5 311 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 CRELD2Q6UXH1 353 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-216ENST00000583804 IRF2BP1Q8IU81 584 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 FAM186BQ8IYM0 893 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 HELQQ8TDG4 1101 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 CCDC127Q96BQ5 260 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 FBXL18Q96ME1 805 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 CEP63Q96MT8 703 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 RPS6KC1Q96S38 1066 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 MMRN2Q9H8L6 949 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 GIT1Q9Y2X7 761 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 LACTBL1A8MY62 500 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 HOXA2O43364 376 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 OFD1O75665 1012 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 EPB41P11171 864 aaKnown RBP11.89□□□□□ -0.51
TOP3A-216ENST00000583804 GATMP50440 423 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 PPP2R3AQ06190 1150 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 SPAG1Q07617 926 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 KRT31Q15323 416 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 DCAF17Q5H9S7 520 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-216ENST00000583804 CHRDL2Q6WN34 429 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 FILIP1Q7Z7B0 1213 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 SPC24Q8NBT2 197 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 TMEM174Q8WUU8 243 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 FAM84AQ96KN4 292 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 ZFP42Q96MM3 310 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 SLC9A7Q96T83 725 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 XPO4Q9C0E2 1151 aaKnown RBP11.89□□□□□ -0.51
TOP3A-216ENST00000583804 THAP9Q9H5L6 903 aa11.89□□□□□ -0.51
TOP3A-216ENST00000583804 ARL5CA6NH57 179 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 TBKBP1A7MCY6 615 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 DGKIO75912 1065 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 IL18RAPO95256 599 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 GNA14O95837 355 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 POMCP01189 267 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 ADRB2P07550 413 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 KRT13P13646 458 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 BMP8BP34820 402 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 ZNF75DP51815 510 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 AFF1P51825 1210 aaKnown RBP11.88□□□□□ -0.51
TOP3A-216ENST00000583804 CYP24A1Q07973 514 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 PAN2Q504Q3 1202 aaKnown RBP11.88□□□□□ -0.51
TOP3A-216ENST00000583804 TCP11X2Q5H9J9 407 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 NOMO2Q5JPE7 1267 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 GLRA4Q5JXX5 417 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 CLLU1OSQ5K130 101 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 RASIP1Q5U651 963 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 PRPF38BQ5VTL8 546 aaKnown RBP11.88□□□□□ -0.51
TOP3A-216ENST00000583804 HERC6Q8IVU3 1022 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 BRSK2Q8IWQ3 736 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 ZC3H3Q8IXZ2 948 aaKnown RBP11.88□□□□□ -0.51
TOP3A-216ENST00000583804 CRIPAKQ8N1N5 446 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 PHOSPHO2Q8TCD6 241 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 URGCPQ8TCY9 931 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 SNX27Q96L92 541 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 NAP1L5Q96NT1 182 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-216ENST00000583804 YME1L1Q96TA2 773 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 CXCL16Q9H2A7 254 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms