RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 ZMYND10O75800 440 aa10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 SRFP11831 508 aa10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 XRCC6P12956 609 aaKnown RBP eCLIP10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 RPL17P18621 184 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 LIG1P18858 919 aa10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 TXKP42681 527 aa10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 NASPP49321 788 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 TRIM29Q14134 588 aa10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 HSP90AA2PQ14568 343 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 LILRA6Q6PI73 481 aa10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 PPP4R3CPQ6ZMV5 832 aa10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 GET4Q7L5D6 327 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 ZBTB8OSQ8IWT0 167 aa10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 ADSSL1Q8N142 457 aa10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 LINC00301Q8NCQ3 95 aa10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 PIGOQ8TEQ8 1089 aa10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 PRIMPOLQ96LW4 560 aa10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 FOXP1Q9H334 677 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 TBC1D17Q9HA65 648 aa10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 PRMT7Q9NVM4 692 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 MTCL1Q9Y4B5 1905 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 CLIC4Q9Y696 253 aa10.71□□□□□ -0.69
CDK5RAP3-227ENST00000583352 BTBD18B2RXH4 712 aa10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 YEATS4O95619 227 aa10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 LAMP2P13473 410 aa10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 TUSC3Q13454 348 aa10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 TMEM132AQ24JP5 1023 aa10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 CCDC183Q5T5S1 534 aa10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 L1TD1Q5T7N2 865 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 PRSS55Q6UWB4 352 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 LRSAM1Q6UWE0 723 aa10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 MAEAQ7L5Y9 396 aa10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 DIS3L2Q8IYB7 885 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 MCPH1Q8NEM0 835 aa10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 RABGGTAQ92696 567 aa10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 SYAP1Q96A49 352 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 TTPALQ9BTX7 342 aa10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 ZFP37Q9Y6Q3 630 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-227ENST00000583352 A0A087WWV3 80 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 CASTOR2A6NHX0 329 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 POTEMA6NI47 508 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 ANHXE9PGG2 379 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 N4BP3O15049 544 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 LETM1O95202 739 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 ATP2B1P20020 1258 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 FSHRP23945 695 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 TOB1P50616 345 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 CEBPZQ03701 1054 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 ELAVL2Q12926 359 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 HTR4Q13639 388 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 SLC39A14Q15043 492 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 PTPAQ15257 358 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 SAFBQ15424 915 aaKnown RBP eCLIP10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 PSMD5Q16401 504 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 FAM187BQ17R55 369 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 RTP2Q5QGT7 225 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 LIN9Q5TKA1 542 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 FAM171A1Q5VUB5 890 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 CDCA2Q69YH5 1023 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 PHLDB3Q6NSJ2 640 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 KCNG4Q8TDN1 519 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 GPR152Q8TDT2 470 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 PIK3R5Q8WYR1 880 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 MTMR9Q96QG7 549 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 C2orf40Q9H1Z8 148 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 SEMA4AQ9H3S1 761 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 FZD8Q9H461 694 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 TUFT1Q9NNX1 390 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 GPRC5CQ9NQ84 441 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 ARHGEF3Q9NR81 526 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 SLC2A4RGQ9NR83 387 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 CACNG4Q9UBN1 327 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 FBXW11Q9UKB1 542 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 PCDHA7Q9UN72 937 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 NUMBLQ9Y6R0 609 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 DOCK8Q8NF50 2099 aa10.69□□□□□ -0.7
CDK5RAP3-227ENST00000583352 A0A1W2PQ27 194 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 A0A1W2PQ64 194 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 A0A1W2PQD8 194 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 WNT7AO00755 349 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 KIF4AO95239 1232 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 THP07101 528 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 HNRNPA1P09651 372 aaKnown RBP eCLIP10.68□□□□□ -0.78e-6■□□□□ 10.1
CDK5RAP3-227ENST00000583352 SPATA31C1P0DKV0 1188 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 ID4P47928 161 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 PRPF4BQ13523 1007 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 MAPK6Q16659 721 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 SPECC1Q5M775 1068 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 PPM1LQ5SGD2 360 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 AXDND1Q5T1B0 1012 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 ADALQ6DHV7 355 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 PDXDC1Q6P996 788 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 DCLRE1AQ6PJP8 1040 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 GRASPQ7Z6J2 395 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 CEP57Q86XR8 500 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 NOSTRINQ8IVI9 506 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 ENGASEQ8NFI3 743 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 ERMNQ8TAM6 284 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 HASPINQ8TF76 798 aa10.68□□□□□ -0.7
CDK5RAP3-227ENST00000583352 NACC1Q96RE7 527 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms