RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 PFKFB2O60825 505 aa16.36■□□□□ 0.21
CDK5RAP3-226ENST00000583182 HOXA9P31269 272 aa16.36■□□□□ 0.21
CDK5RAP3-226ENST00000583182 MLF2Q15773 248 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-226ENST00000583182 CALCRLQ16602 461 aa16.36■□□□□ 0.21
CDK5RAP3-226ENST00000583182 CCDC43Q96MW1 224 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-226ENST00000583182 FZD8Q9H461 694 aa16.36■□□□□ 0.21
CDK5RAP3-226ENST00000583182 TTC12Q9H892 705 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-226ENST00000583182 PRMT7Q9NVM4 692 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-226ENST00000583182 HCFC1R1Q9NWW0 138 aa16.36■□□□□ 0.21
CDK5RAP3-226ENST00000583182 SNTG2Q9NY99 539 aa16.36■□□□□ 0.21
CDK5RAP3-226ENST00000583182 POLIQ9UNA4 740 aa16.36■□□□□ 0.21
CDK5RAP3-226ENST00000583182 TRIP11Q15643 1979 aa16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 RECQL4O94761 1208 aa16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 IGFBP6P24592 240 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 KRT2P35908 639 aa16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 TXKP42681 527 aa16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 PUM1Q14671 1186 aaKnown RBP eCLIP16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 SLC44A4Q53GD3 710 aa16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 CDCA2Q69YH5 1023 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 MTSS1LQ765P7 747 aa16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 SLC7A14Q8TBB6 771 aa16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 PRIMPOLQ96LW4 560 aa16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 KXD1Q9BQD3 176 aa16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 PDZD7Q9H5P4 517 aa16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 DLL3Q9NYJ7 618 aa16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 ORC3Q9UBD5 711 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 USP20Q9Y2K6 914 aa16.35■□□□□ 0.21
CDK5RAP3-226ENST00000583182 NCOR2Q9Y618 2525 aa16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 KINO60870 393 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 THP07101 528 aa16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 SPATA31C1P0DKV0 1188 aa16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 FDPSP14324 419 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 CD72P21854 359 aa16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 PRKCQQ04759 706 aa16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 RAB33AQ14088 237 aa16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 UBXN2BQ14CS0 331 aa16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 FAM187BQ17R55 369 aa16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 AXDND1Q5T1B0 1012 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 NOSTRINQ8IVI9 506 aa16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 NPAS3Q8IXF0 933 aa16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 MTMR9Q96QG7 549 aa16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 BCO2Q9BYV7 579 aa16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 SPATA6Q9NWH7 488 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 DNMT3BQ9UBC3 853 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-226ENST00000583182 FAM170BA6NMN3 283 aa16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 N4BP3O15049 544 aa16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 LAMTOR5O43504 91 aa16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 XYLBO75191 536 aa16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 EDN1P05305 212 aa16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 POU2F2P09086 479 aa16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 XRCC6P12956 609 aaKnown RBP eCLIP16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 OR1D2P34982 312 aa16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 ELAVL2Q12926 359 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 ZNF528Q3MIS6 628 aa16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 RSPO2Q6UXX9 243 aaPredicted RBP16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 BSNDQ8WZ55 320 aa16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 OSBPL6Q9BZF3 934 aa16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 LTB4R2Q9NPC1 389 aa16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 FBXO4Q9UKT5 387 aa16.33■□□□□ 0.2
CDK5RAP3-226ENST00000583182 BTBD18B2RXH4 712 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 NEMFO60524 1076 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 FGFR3P22607 806 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 PRPF4BQ13523 1007 aaKnown RBP16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 UVSSAQ2YD98 709 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 PABPC1LQ4VXU2 614 aaKnown RBP16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 EEF1DP3Q658K8 133 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 PDXDC1Q6P996 788 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 POTEHQ6S545 545 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 ZBTB8OSQ8IWT0 167 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 MCPH1Q8NEM0 835 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 ING5Q8WYH8 240 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 WASF1Q92558 559 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 CCDC113Q9H0I3 377 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 TMEM60Q9H2L4 133 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 BRMS1Q9HCU9 246 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 MTRRQ9UBK8 725 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 KCNH3Q9ULD8 1083 aa16.32■□□□□ 0.2
CDK5RAP3-226ENST00000583182 MED24O75448 989 aa16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 PRKCBP05771 671 aa16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 ATP2B1P20020 1258 aa16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 TARSP26639 723 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 PFKPQ01813 784 aa16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 CSTF1Q05048 431 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 TMEM132AQ24JP5 1023 aa16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 RSPO4Q2I0M5 234 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 GLRA4Q5JXX5 417 aa16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 VARS2Q5ST30 1063 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 CD300LGQ6UXG3 332 aa16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 CATSPER3Q86XQ3 398 aa16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 PLA2G2FQ9BZM2 168 aa16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 C2orf40Q9H1Z8 148 aa16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 GDAQ9Y2T3 454 aa16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 CDY1Q9Y6F8 540 aa16.31■□□□□ 0.2
CDK5RAP3-226ENST00000583182 SHISA7A6NL88 538 aa16.3■□□□□ 0.2
CDK5RAP3-226ENST00000583182 TMEM189-UBE2V1I3L0A0 370 aa16.3■□□□□ 0.2
CDK5RAP3-226ENST00000583182 ACKR2O00590 384 aa16.3■□□□□ 0.2
CDK5RAP3-226ENST00000583182 SPTLC1O15269 473 aa16.3■□□□□ 0.2
CDK5RAP3-226ENST00000583182 LIG1P18858 919 aa16.3■□□□□ 0.2
CDK5RAP3-226ENST00000583182 CLCNKBP51801 687 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms