RNA–Protein interactions for RNA: ENST00000582509.1

TRAPPC8-209, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-209ENST00000582509 ATXN7L2Q5T6C5 722 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC8-209ENST00000582509 AFMIDQ63HM1 303 aa6.71□□□□□ -1.34
TRAPPC8-209ENST00000582509 SPATA31D4Q6ZUB0 917 aa6.71□□□□□ -1.34
TRAPPC8-209ENST00000582509 ZBTB46Q86UZ6 589 aa6.71□□□□□ -1.34
TRAPPC8-209ENST00000582509 RPUSD2Q8IZ73 545 aaKnown RBP6.71□□□□□ -1.34
TRAPPC8-209ENST00000582509 SLC25A43Q8WUT9 341 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC8-209ENST00000582509 CHMP4CQ96CF2 233 aa6.71□□□□□ -1.34
TRAPPC8-209ENST00000582509 REXO4Q9GZR2 422 aaKnown RBP6.71□□□□□ -1.34
TRAPPC8-209ENST00000582509 KCNH6Q9H252 994 aa6.71□□□□□ -1.34
TRAPPC8-209ENST00000582509 PCDHGA9Q9Y5G4 932 aaKnown RBP6.71□□□□□ -1.34
TRAPPC8-209ENST00000582509 PCDHGA8Q9Y5G5 932 aa6.71□□□□□ -1.34
TRAPPC8-209ENST00000582509 PCDHGA7Q9Y5G6 932 aa6.71□□□□□ -1.34
TRAPPC8-209ENST00000582509 PCDHGA6Q9Y5G7 932 aa6.71□□□□□ -1.34
TRAPPC8-209ENST00000582509 PCDHGA3Q9Y5H0 932 aa6.71□□□□□ -1.34
TRAPPC8-209ENST00000582509 LOC105371045A0A1W2PR82 267 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 GAGE12BA1L429 117 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 GAGE12HA6NDE8 117 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 SCAF4O95104 1147 aaKnown RBP6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 RAP2AP10114 183 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 ALAS1P13196 640 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 VCAM1P19320 739 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 MAKP20794 623 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 ANKS6Q68DC2 871 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 RHOT1Q8IXI2 618 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 SYNE4Q8N205 404 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 MIER2Q8N344 545 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 CCHCR1Q8TD31 782 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 MRI1Q9BV20 369 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 SLC46A2Q9BY10 475 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 TDP1Q9NUW8 608 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 TUBD1Q9UJT1 453 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 SIK3Q9Y2K2 1263 aa6.7□□□□□ -1.34
TRAPPC8-209ENST00000582509 PEG3Q9GZU2 1588 aa6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 GRXCR1A8MXD5 290 aa6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 POMCP01189 267 aa6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 SLC6A9P48067 706 aa6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 CDC42EP1Q00587 391 aa6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 KIF23Q02241 960 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 ABHD18Q0P651 414 aa6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 TMEM240Q5SV17 173 aa6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 RSPH3Q86UC2 560 aa6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 PLXDC1Q8IUK5 500 aa6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 ZNF276Q8N554 614 aa6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 CPT1CQ8TCG5 803 aa6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 ZNF483Q8TF39 744 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 COA7Q96BR5 231 aa6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 DDX56Q9NY93 547 aaKnown RBP6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 TOP2AP11388 1531 aaKnown RBP6.69□□□□□ -1.34
TRAPPC8-209ENST00000582509 DTNBO60941 627 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 ZNF202O95125 648 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 DDCP20711 480 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 NEK2P51955 445 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 MXRA7P84157 204 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 NHLH2Q02577 135 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 CREMQ03060 361 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 MTM1Q13496 603 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 SEM1Q6ZVN7 128 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 GDF7Q7Z4P5 450 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 OR2I1PQ8NGU4 316 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 SLC35B2Q8TB61 432 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 DPF2Q92785 391 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 HAS1Q92839 578 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 MAN1C1Q9NR34 630 aa6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 REXO2Q9Y3B8 237 aaKnown RBP6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 CFAP20Q9Y6A4 193 aaKnown RBP6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 MYBBP1AQ9BQG0 1328 aaKnown RBP6.68□□□□□ -1.34
TRAPPC8-209ENST00000582509 SMARCA2P51531 1590 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 NPIPB8E9PQR5 432 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 RNASET2O00584 256 aaKnown RBP6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 CYR61O00622 381 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 HTRA2O43464 458 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 FAM20BO75063 409 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 HLA-DOAP06340 250 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 ADH4P08319 380 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 PDGFRBP09619 1106 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 APOBEC3AP31941 199 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 ALDH1A3P47895 512 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 CTXN1P60606 82 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 RAP2BP61225 183 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 RAB39AQ14964 217 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 UAP1L1Q3KQV9 507 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 ARMC6Q6NXE6 501 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 RNF169Q8NCN4 708 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 NLGN4YQ8NFZ3 816 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 STON2Q8WXE9 905 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 LENG9Q96B70 501 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 LDAHQ9H6V9 325 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 SRRDQ9UH36 339 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 FZD1Q9UP38 647 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 IPPQ9Y573 584 aa6.67□□□□□ -1.34
TRAPPC8-209ENST00000582509 E2F8A0AVK6 867 aa6.66□□□□□ -1.34
TRAPPC8-209ENST00000582509 DRGXA6NNA5 263 aa6.66□□□□□ -1.34
TRAPPC8-209ENST00000582509 DGCR2P98153 550 aa6.66□□□□□ -1.34
TRAPPC8-209ENST00000582509 ATP8B2P98198 1209 aa6.66□□□□□ -1.34
TRAPPC8-209ENST00000582509 SLC25A3Q00325 362 aa6.66□□□□□ -1.34
TRAPPC8-209ENST00000582509 UBXN2BQ14CS0 331 aa6.66□□□□□ -1.34
TRAPPC8-209ENST00000582509 ZNF529Q6P280 563 aa6.66□□□□□ -1.34
TRAPPC8-209ENST00000582509 TTC7BQ86TV6 843 aa6.66□□□□□ -1.34
TRAPPC8-209ENST00000582509 FBXO18Q8NFZ0 1043 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms