RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	ELAVL1	Q15717	326 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	BRDT	Q58F21	947 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	BTNL9	Q6UXG8	535 aa		4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	CNTD1	Q8N815	330 aa		4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	OR5M3	Q8NGP4	307 aa		4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	TSPEAR	Q8WU66	669 aa		4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	SNX33	Q8WV41	574 aa		4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	FATE1	Q969F0	183 aa		4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	KRTAP4-9	Q9BYQ8	210 aa		4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	QRSL1	Q9H0R6	528 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	IFT122	Q9HBG6	1241 aa		4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	HOMER2	Q9NSB8	354 aa		4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	DNAJC28	Q9NX36	388 aa		4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	GIT1	Q9Y2X7	761 aa		4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	SYNM	O15061	1565 aa		4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	RPGRIP1L	Q68CZ1	1315 aa		4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	PIK3C2B	O00750	1634 aa		4.17	□□□□□ -1.74
MSI2-215	ENST00000582453	ZNF142	P52746	1687 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	ADGRB3	O60242	1522 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	DHX57	Q6P158	1386 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	TMEM2	Q9UHN6	1383 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	CCDC144A	A2RUR9	1427 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	ZFYVE9	O95405	1425 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	KRTAP23-1	A1A580	65 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	TRIM75P	A6NK02	468 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	ALG1L2	C9J202	215 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	HOXA3	O43365	443 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	MFAP3L	O75121	409 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	GAST	P01350	101 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	S100B	P04271	92 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	CASR	P41180	1078 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	GZMK	P49863	264 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	SLC5A3	P53794	718 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	EVA1C	P58658	441 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	CDK17	Q00537	523 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	SRSF2	Q01130	221 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	IDI1	Q13907	227 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	ADRM1	Q16186	407 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	TOR2A	Q5JU69	321 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	GGN	Q86UU5	652 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	IL17RA	Q96F46	866 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	KRTAP4-2	Q9BYR5	136 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	HECA	Q9UBI9	543 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	MYO3A	Q8NEV4	1616 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	MED14	O60244	1454 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	RPTOR	Q8N122	1335 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	PREX1	Q8TCU6	1659 aa		4.16	□□□□□ -1.74
MSI2-215	ENST00000582453	UGGT1	Q9NYU2	1555 aa		4.15	□□□□□ -1.74
MSI2-215	ENST00000582453	SPATA31E1	Q6ZUB1	1445 aa		4.15	□□□□□ -1.74
MSI2-215	ENST00000582453	MATN3	O15232	486 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	STC2	O76061	302 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	GNAT2	P19087	354 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	TNFRSF1A	P19438	455 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	MTNR1B	P49286	362 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	GUCY2F	P51841	1108 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	MALL	Q13021	153 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	MRPL49	Q13405	166 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	INAVA	Q3KP66	663 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	USP39	Q53GS9	565 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	METTL24	Q5JXM2	366 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	LCE5A	Q5TCM9	118 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	MBNL2	Q5VZF2	373 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	FAM180A	Q6UWF9	173 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	ABHD15	Q6UXT9	468 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	RNF207	Q6ZRF8	634 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	SPRED1	Q7Z699	444 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	AMOTL1	Q8IY63	956 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	GSPT2	Q8IYD1	628 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	GPR156	Q8NFN8	814 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	MDGA1	Q8NFP4	955 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	ZNF480	Q8WV37	535 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	SSH1	Q8WYL5	1049 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	ST8SIA2	Q92186	375 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	CDC5L	Q99459	802 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	PDCD2L	Q9BRP1	358 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	ACE2	Q9BYF1	805 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	TRIM8	Q9BZR9	551 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	GREM2	Q9H772	168 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	CHPF2	Q9P2E5	772 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	SCOC	Q9UIL1	159 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	GPR45	Q9Y5Y3	372 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453		E9PCH4	1651 aa		4.15	□□□□□ -1.75
MSI2-215	ENST00000582453	GOLGA6L6	A8MZA4	724 aa		4.14	□□□□□ -1.75
MSI2-215	ENST00000582453	AKR1B10	O60218	316 aa		4.14	□□□□□ -1.75
MSI2-215	ENST00000582453	ITGA10	O75578	1167 aa		4.14	□□□□□ -1.75
MSI2-215	ENST00000582453	CFB	P00751	764 aa		4.14	□□□□□ -1.75
MSI2-215	ENST00000582453	CRHR1	P34998	444 aa		4.14	□□□□□ -1.75
MSI2-215	ENST00000582453	MAN2A2	P49641	1150 aa		4.14	□□□□□ -1.75
MSI2-215	ENST00000582453	CCT2	P78371	535 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-215	ENST00000582453	CRHR2	Q13324	411 aa		4.14	□□□□□ -1.75
MSI2-215	ENST00000582453	RRP1B	Q14684	758 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms