RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 RPF1Q9H9Y2 349 aaKnown RBP11.37□□□□□ -0.59
TOP3A-212ENST00000582122 RAPGEFL1Q9UHV5 662 aa11.37□□□□□ -0.59
TOP3A-212ENST00000582122 GDAQ9Y2T3 454 aa11.37□□□□□ -0.59
TOP3A-212ENST00000582122 HCN4Q9Y3Q4 1203 aa11.37□□□□□ -0.59
TOP3A-212ENST00000582122 ARIH1Q9Y4X5 557 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-212ENST00000582122 NLRC5Q86WI3 1866 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 EPOPA6NHQ4 379 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 MEIS3P2A8K0S8 358 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 GOLGA6L22H0YM25 854 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 RPN1P04843 607 aaKnown RBP11.36□□□□□ -0.59
TOP3A-212ENST00000582122 EDN1P05305 212 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 RPL9P32969 192 aaKnown RBP11.36□□□□□ -0.59
TOP3A-212ENST00000582122 PPP2R3AQ06190 1150 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 CUL4BQ13620 913 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 BMT2Q1RMZ1 405 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 ZC2HC1CQ53FD0 456 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-212ENST00000582122 EPM2AIP1Q7L775 607 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-212ENST00000582122 DDX53Q86TM3 631 aaKnown RBP11.36□□□□□ -0.59
TOP3A-212ENST00000582122 NT5DC4Q86YG4 428 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 COLGALT2Q8IYK4 626 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 POF1BQ8WVV4 589 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 IGSF21Q96ID5 467 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 CHAMP1Q96JM3 812 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 ZBTB45Q96K62 511 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-212ENST00000582122 SNX27Q96L92 541 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 ZFP42Q96MM3 310 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 CDCA3Q99618 268 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-212ENST00000582122 GBP3Q9H0R5 595 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 BLZF1Q9H2G9 400 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 ASB7Q9H672 318 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 TLR9Q9NR96 1032 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 TBC1D7Q9P0N9 293 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 CNTN3Q9P232 1028 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 AGO2Q9UKV8 859 aaKnown RBP11.36□□□□□ -0.59
TOP3A-212ENST00000582122 COG5Q9UP83 839 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 DERAQ9Y315 318 aa11.36□□□□□ -0.59
TOP3A-212ENST00000582122 BDP1A6H8Y1 2624 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 SMIM28A0A1B0GU29 152 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 RFXAPO00287 272 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 NRP1O14786 923 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 GRM6O15303 877 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 TRAPPC3O43617 180 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 RHOBTB3O94955 611 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 IL18RAPO95256 599 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 ADRB2P07550 413 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 MYBP10242 640 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 HARSP12081 509 aaKnown RBP11.35□□□□□ -0.59
TOP3A-212ENST00000582122 CYP3A5P20815 502 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 PPP1R2P41236 205 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 OR1G1P47890 313 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 CREMQ03060 361 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 SURF1Q15526 300 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 KNOP1Q1ED39 458 aaKnown RBP11.35□□□□□ -0.59
TOP3A-212ENST00000582122 ARMCX5Q6P1M9 558 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 PDXDC1Q6P996 788 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 ALKAL1Q6UXT8 129 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 ZNF280BQ86YH2 543 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 GSTCDQ8NEC7 633 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 ENGASEQ8NFI3 743 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 MICAL1Q8TDZ2 1067 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 GSDMAQ96QA5 445 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 GOLPH3LQ9H4A5 285 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 ALG13Q9NP73 1137 aaKnown RBP11.35□□□□□ -0.59
TOP3A-212ENST00000582122 TSHZ2Q9NRE2 1034 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 KLK14Q9P0G3 267 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 USP20Q9Y2K6 914 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 IRAK3Q9Y616 596 aa11.35□□□□□ -0.59
TOP3A-212ENST00000582122 PRRC2BQ5JSZ5 2229 aaKnown RBP11.34□□□□□ -0.59
TOP3A-212ENST00000582122 TTC26A0AVF1 554 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 ARHGEF37A1IGU5 675 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 TMEM189-UBE2V1I3L0A0 370 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 PTGESO14684 152 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 TADA2AO75478 443 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 DDHD2O94830 711 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 PRPF6O94906 941 aaKnown RBP11.34□□□□□ -0.59
TOP3A-212ENST00000582122 C1RP00736 705 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 SRGAP2BP0DMP2 458 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 HOXD11P31277 338 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-212ENST00000582122 SLC11A1P49279 550 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 OSTNP61366 133 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 DPYDQ12882 1025 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 SNW1Q13573 536 aaKnown RBP11.34□□□□□ -0.59
TOP3A-212ENST00000582122 MYBPC2Q14324 1141 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 SMC1AQ14683 1233 aaKnown RBP11.34□□□□□ -0.59
TOP3A-212ENST00000582122 SLC10A6Q3KNW5 377 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 KMT5BQ4FZB7 885 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 ELMSAN1Q6PJG2 1045 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 DCLRE1AQ6PJP8 1040 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 SPRED2Q7Z698 418 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 C12orf56Q8IXR9 622 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 MICALL1Q8N3F8 863 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 TMEM174Q8WUU8 243 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 PPP1R10Q96QC0 940 aaKnown RBP11.34□□□□□ -0.59
TOP3A-212ENST00000582122 ENTPD7Q9NQZ7 604 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 DNAJB4Q9UDY4 337 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 CPSF3Q9UKF6 684 aaKnown RBP11.34□□□□□ -0.59
TOP3A-212ENST00000582122 UBQLN1Q9UMX0 589 aaKnown RBP11.34□□□□□ -0.59
TOP3A-212ENST00000582122 C2CD2Q9Y426 696 aa11.34□□□□□ -0.59
TOP3A-212ENST00000582122 SF3B1O75533 1304 aaKnown RBP eCLIP11.34□□□□□ -0.59
TOP3A-212ENST00000582122 CITO14578 2027 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms