RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 C2orf71A6NGG8 1288 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 NR1I2O75469 434 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 SOD2P04179 222 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 BMP1P13497 986 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 ADSSP30520 456 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 LIG4P49917 911 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 CASP5P51878 434 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 YARSP54577 528 aaKnown RBP13.8□□□□□ -0.2
SNORD55-201ENST00000581525 KCNA1Q09470 495 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 COASYQ13057 564 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 SMC1AQ14683 1233 aaKnown RBP13.8□□□□□ -0.2
SNORD55-201ENST00000581525 POSTNQ15063 836 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 DUSP6Q16828 381 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 AAK1Q2M2I8 961 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 LEXMQ3ZCV2 418 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 KIAA0319Q5VV43 1072 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 CD300LGQ6UXG3 332 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 TMC7Q7Z402 723 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 ZBTB33Q86T24 672 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 VPS52Q8N1B4 723 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 ZNF507Q8TCN5 953 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 PAGE5Q96GU1 130 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 MSLNLQ96KJ4 702 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 UROC1Q96N76 676 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 ZMAT2Q96NC0 199 aaKnown RBP13.8□□□□□ -0.2
SNORD55-201ENST00000581525 ACCSQ96QU6 501 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 RPS6KC1Q96S38 1066 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 TCF25Q9BQ70 676 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 FGFBP2Q9BYJ0 223 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 GBP3Q9H0R5 595 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 ZHX3Q9H4I2 956 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 MRPL44Q9H9J2 332 aaKnown RBP13.8□□□□□ -0.2
SNORD55-201ENST00000581525 RXFP1Q9HBX9 757 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 SERTAD1Q9UHV2 236 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 CPSF3Q9UKF6 684 aaKnown RBP13.8□□□□□ -0.2
SNORD55-201ENST00000581525 GDAQ9Y2T3 454 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.8□□□□□ -0.2
SNORD55-201ENST00000581525 ATG2AQ2TAZ0 1938 aa13.8□□□□□ -0.2
SNORD55-201ENST00000581525 HIDE1A8MVS5 230 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 HNRNPDLO14979 420 aaKnown RBP13.79□□□□□ -0.2
SNORD55-201ENST00000581525 EIF3DO15371 548 aaKnown RBP eCLIP13.79□□□□□ -0.2
SNORD55-201ENST00000581525 KLRC4O43908 158 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 CXCL14O95715 111 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 IDEP14735 1019 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 OR1G1P47890 313 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 NDUFA8P51970 172 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 DSG1Q02413 1049 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 UPP1Q16831 310 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 DCLRE1AQ6PJP8 1040 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 CD302Q8IX05 232 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 TMEM174Q8WUU8 243 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 PAAF1Q9BRP4 392 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 HERC2P3Q9BVR0 1158 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 TLE6Q9H808 572 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 TMEM206Q9H813 350 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 SLC38A7Q9NVC3 462 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 ADAM28Q9UKQ2 775 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 PCDHGC5Q9Y5F6 944 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 MUC3AQ02505 3323 aa13.79□□□□□ -0.2
SNORD55-201ENST00000581525 F8W810 466 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 PAPLNO95428 1278 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 GLP2RO95838 553 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 MYBP10242 640 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 CYP3A5P20815 502 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 GARTP22102 1010 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 RPL9P32969 192 aaKnown RBP13.78□□□□□ -0.2
SNORD55-201ENST00000581525 GTF2F1P35269 517 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNORD55-201ENST00000581525 HOXD13P35453 343 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 SYKP43405 635 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 SNRPFP62306 86 aaKnown RBP13.78□□□□□ -0.2
SNORD55-201ENST00000581525 SOX4Q06945 474 aaPredicted RBP13.78□□□□□ -0.2
SNORD55-201ENST00000581525 CUL4BQ13620 913 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 HSP90AA2PQ14568 343 aaPredicted RBP13.78□□□□□ -0.2
SNORD55-201ENST00000581525 BMS1Q14692 1282 aaKnown RBP13.78□□□□□ -0.2
SNORD55-201ENST00000581525 PTPN14Q15678 1187 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 ENOX2Q16206 610 aaKnown RBP13.78□□□□□ -0.2
SNORD55-201ENST00000581525 BMT2Q1RMZ1 405 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 TJAP1Q5JTD0 557 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 CRELD2Q6UXH1 353 aaPredicted RBP13.78□□□□□ -0.2
SNORD55-201ENST00000581525 TAS1R1Q7RTX1 841 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 CEP57L1Q8IYX8 460 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 ENGASEQ8NFI3 743 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.78□□□□□ -0.2
SNORD55-201ENST00000581525 MICAL1Q8TDZ2 1067 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 BICD1Q96G01 975 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 DDX27Q96GQ7 796 aaKnown RBP13.78□□□□□ -0.2
SNORD55-201ENST00000581525 GPR62Q9BZJ7 368 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 GOLPH3LQ9H4A5 285 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 CLEC1BQ9P126 229 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 EXOC7Q9UPT5 735 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 SSX2IPQ9Y2D8 614 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 TCHHQ07283 1943 aa13.78□□□□□ -0.2
SNORD55-201ENST00000581525 KIAA0391O15091 583 aaKnown RBP13.77□□□□□ -0.21
SNORD55-201ENST00000581525 GCNT3O95395 438 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 LRPAP1P30533 357 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 TNFSF9P41273 254 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 NRIP1P48552 1158 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 OSTNP61366 133 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 ASIC1P78348 528 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 TFF2Q03403 129 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms