RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 GLYCTKQ8IVS8 523 aa11.7□□□□□ -0.54
RFFL-209ENST00000581265 DCLK2Q8N568 766 aa11.7□□□□□ -0.54
RFFL-209ENST00000581265 ADPGKQ9BRR6 497 aa11.7□□□□□ -0.54
RFFL-209ENST00000581265 FOXP1Q9H334 677 aaPredicted RBP11.7□□□□□ -0.54
RFFL-209ENST00000581265 NCDNQ9UBB6 729 aa11.7□□□□□ -0.54
RFFL-209ENST00000581265 CACNG4Q9UBN1 327 aa11.7□□□□□ -0.54
RFFL-209ENST00000581265 FBXW11Q9UKB1 542 aa11.7□□□□□ -0.54
RFFL-209ENST00000581265 ARHGEF35A5YM69 484 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 CASTOR2A6NHX0 329 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 RECQL4O94761 1208 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 KIF4AO95239 1232 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 PRKCBP05771 671 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 OR52Z1P0C646 297 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 EFNA5P52803 228 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 GUCY1B3Q02153 619 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 HTR4Q13639 388 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 ZNF174Q15697 407 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 PHLDB3Q6NSJ2 640 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 PDXDC1Q6P996 788 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 CEP57Q86XR8 500 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 NOSTRINQ8IVI9 506 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 DEPTORQ8TB45 409 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 LLPHQ9BRT6 129 aaKnown RBP11.69□□□□□ -0.54
RFFL-209ENST00000581265 CXCL16Q9H2A7 254 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 SLC2A4RGQ9NR83 387 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 LIMCH1Q9UPQ0 1083 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 USP20Q9Y2K6 914 aa11.69□□□□□ -0.54
RFFL-209ENST00000581265 TMEM189-UBE2V1I3L0A0 370 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 EDN1P05305 212 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 NEFLP07196 543 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 FGFR3P22607 806 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 FSHRP23945 695 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 HOXA9P31269 272 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 TRAPPC10P48553 1259 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 RBM25P49756 843 aaKnown RBP11.68□□□□□ -0.54
RFFL-209ENST00000581265 RAB33AQ14088 237 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 PDIA5Q14554 519 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 PSMD5Q16401 504 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 ECM1Q16610 540 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 TMEM132AQ24JP5 1023 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 UVSSAQ2YD98 709 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 DCAF4L1Q3SXM0 396 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 EEF1DP3Q658K8 133 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 DCLRE1AQ6PJP8 1040 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.68□□□□□ -0.54
RFFL-209ENST00000581265 RTL10Q7L3V2 364 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 GET4Q7L5D6 327 aaPredicted RBP11.68□□□□□ -0.54
RFFL-209ENST00000581265 GRASPQ7Z6J2 395 aaPredicted RBP11.68□□□□□ -0.54
RFFL-209ENST00000581265 C4orf32Q8N8J7 132 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 FBXO18Q8NFZ0 1043 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 GPR152Q8TDT2 470 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 HASPINQ8TF76 798 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 KIFAP3Q92845 792 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 C8orf76Q96K31 380 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 IFT74Q96LB3 600 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 TBC1D17Q9HA65 648 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 PPP4R2Q9NY27 417 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 CDH7Q9ULB5 785 aa11.68□□□□□ -0.54
RFFL-209ENST00000581265 DOCK6Q96HP0 2047 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 MYO15AQ9UKN7 3530 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 K7ERI5 159 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 ADAM12O43184 909 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 B3GAT3O94766 335 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 C8AP07357 584 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 POU2F2P09086 479 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
RFFL-209ENST00000581265 SPECC1Q5M775 1068 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 TTC38Q5R3I4 469 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 PPM1LQ5SGD2 360 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 NT5DC1Q5TFE4 455 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 LIN9Q5TKA1 542 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 ATF7IP2Q5U623 682 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 HAUS3Q68CZ6 603 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 GPR161Q8N6U8 529 aaKnown RBP11.67□□□□□ -0.54
RFFL-209ENST00000581265 SECISBP2LQ93073 1101 aaKnown RBP11.67□□□□□ -0.54
RFFL-209ENST00000581265 PPP1R10Q96QC0 940 aaKnown RBP11.67□□□□□ -0.54
RFFL-209ENST00000581265 RPP25Q9BUL9 199 aaKnown RBP11.67□□□□□ -0.54
RFFL-209ENST00000581265 BHMT2Q9H2M3 363 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 ARHGEF3Q9NR81 526 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 CDV3Q9UKY7 258 aaKnown RBP11.67□□□□□ -0.54
RFFL-209ENST00000581265 CA14Q9ULX7 337 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 TNFSF13BQ9Y275 285 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 GDAQ9Y2T3 454 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 SIT1Q9Y3P8 196 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 NUMBLQ9Y6R0 609 aa11.67□□□□□ -0.54
RFFL-209ENST00000581265 TRAPPC3O43617 180 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 KINO60870 393 aaKnown RBP11.66□□□□□ -0.54
RFFL-209ENST00000581265 XYLBO75191 536 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 SEC24BO95487 1268 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 LIG1P18858 919 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 IGFBP6P24592 240 aaPredicted RBP11.66□□□□□ -0.54
RFFL-209ENST00000581265 OR1D2P34982 312 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 CCT6AP40227 531 aaKnown RBP11.66□□□□□ -0.54
RFFL-209ENST00000581265 ATXN1P54253 815 aaKnown RBP11.66□□□□□ -0.54
RFFL-209ENST00000581265 STARD6P59095 220 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 NTHL1P78549 312 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 UPP1Q16831 310 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 AXDND1Q5T1B0 1012 aaPredicted RBP11.66□□□□□ -0.54
RFFL-209ENST00000581265 ERICH6BQ5W0A0 696 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 PARM1Q6UWI2 310 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms