RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 AKAP5P24588 427 aa15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 HOXA6P31267 233 aa15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 OR1D2P34982 312 aa15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 ANTXR2P58335 489 aa15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 WWC2Q6AWC2 1192 aa15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 ZNF746Q6NUN9 644 aaPredicted RBP15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 ZNF654Q8IZM8 581 aa15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 ZNF710Q8N1W2 664 aa15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 CSGALNACT1Q8TDX6 532 aa15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 GJA10Q969M2 543 aa15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 ZFYVE19Q96K21 471 aa15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 ZC3H10Q96K80 434 aaKnown RBP15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 HNRNPABQ99729 332 aaKnown RBP15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 TTPALQ9BTX7 342 aa15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 SNTG2Q9NY99 539 aa15.77■□□□□ 0.12
CSNK1D-213ENST00000580446 CASTOR2A6NHX0 329 aa15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 SPECC1L-ADORA2AF8WAN1 911 aa15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 PYCARD-AS1I3L0S3 204 aa15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 ADAMTS3O15072 1205 aa15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 KIF4AO95239 1232 aa15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 IGFBP6P24592 240 aaPredicted RBP15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 SREBF1P36956 1147 aa15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 TARBP2Q15633 366 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 PRSS36Q5K4E3 855 aa15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 ANKRD45Q5TZF3 282 aa15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 HS6ST3Q8IZP7 471 aa15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 CPB2Q96IY4 423 aa15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 IFT122Q9HBG6 1241 aa15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 BMP2KQ9NSY1 1161 aaPredicted RBP15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 PCDHB15Q9Y5E8 787 aa15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 APC2O95996 2303 aa15.76■□□□□ 0.11
CSNK1D-213ENST00000580446 ASXL3Q9C0F0 2248 aa15.75■□□□□ 0.11
CSNK1D-213ENST00000580446 SF3B1O75533 1304 aaKnown RBP eCLIP15.75■□□□□ 0.116e-7■■■■■ 43.1
CSNK1D-213ENST00000580446 SRGAP2CP0DJJ0 459 aa15.75■□□□□ 0.11
CSNK1D-213ENST00000580446 NAPAP54920 295 aa15.75■□□□□ 0.11
CSNK1D-213ENST00000580446 IRX4P78413 519 aa15.75■□□□□ 0.11
CSNK1D-213ENST00000580446 HNRNPUQ00839 825 aaKnown RBP eCLIP15.75■□□□□ 0.113e-18■□□□□ 9.1
CSNK1D-213ENST00000580446 JAKMIP3Q5VZ66 844 aa15.75■□□□□ 0.11
CSNK1D-213ENST00000580446 ZNF410Q86VK4 478 aa15.75■□□□□ 0.11
CSNK1D-213ENST00000580446 PIK3R5Q8WYR1 880 aa15.75■□□□□ 0.11
CSNK1D-213ENST00000580446 SMARCD2Q92925 531 aa15.75■□□□□ 0.11
CSNK1D-213ENST00000580446 CEP89Q96ST8 783 aa15.75■□□□□ 0.11
CSNK1D-213ENST00000580446 DSCC1Q9BVC3 393 aa15.75■□□□□ 0.11
CSNK1D-213ENST00000580446 INO80BQ9C086 356 aaPredicted RBP15.75■□□□□ 0.11
CSNK1D-213ENST00000580446 NXF3Q9H4D5 531 aaKnown RBP15.75■□□□□ 0.11
CSNK1D-213ENST00000580446 GTSE1Q9NYZ3 720 aa15.75■□□□□ 0.11
CSNK1D-213ENST00000580446 HEPACAM2A8MVW5 462 aa15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 KHNYNO15037 678 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 MEFVO15553 781 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 GBP1P32455 592 aa15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 CTHP32929 405 aa15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 TRDNQ13061 729 aa15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 CCINQ13939 588 aa15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 HSP90AA2PQ14568 343 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 ELF2Q15723 593 aa15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 DGKKQ5KSL6 1271 aa15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 CDR2LQ86X02 465 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 SMAP1Q8IYB5 467 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 GSTCDQ8NEC7 633 aa15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 ZSCAN18Q8TBC5 510 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 FAM200AQ8TCP9 573 aa15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 CCDC86Q9H6F5 360 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 TRPV5Q9NQA5 729 aa15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 FSCN3Q9NQT6 498 aa15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 DISC1Q9NRI5 854 aa15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 DIAPH3Q9NSV4 1193 aa15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 CDY1Q9Y6F8 540 aa15.74■□□□□ 0.11
CSNK1D-213ENST00000580446 CALM1P0DP23 149 aa15.73■□□□□ 0.11
CSNK1D-213ENST00000580446 CALM2P0DP24 149 aa15.73■□□□□ 0.11
CSNK1D-213ENST00000580446 CALM3P0DP25 149 aa15.73■□□□□ 0.11
CSNK1D-213ENST00000580446 PTPN2P17706 415 aa15.73■□□□□ 0.11
CSNK1D-213ENST00000580446 DNM2P50570 870 aa15.73■□□□□ 0.11
CSNK1D-213ENST00000580446 ADCY7P51828 1080 aa15.73■□□□□ 0.11
CSNK1D-213ENST00000580446 PLA2G4FQ68DD2 849 aa15.73■□□□□ 0.11
CSNK1D-213ENST00000580446 NIPA1Q7RTP0 329 aa15.73■□□□□ 0.11
CSNK1D-213ENST00000580446 IGDCC4Q8TDY8 1250 aa15.73■□□□□ 0.11
CSNK1D-213ENST00000580446 RIC8AQ9NPQ8 531 aa15.73■□□□□ 0.11
CSNK1D-213ENST00000580446 TBC1D22BQ9NU19 505 aa15.73■□□□□ 0.11
CSNK1D-213ENST00000580446 SLC8A2Q9UPR5 921 aa15.73■□□□□ 0.11
CSNK1D-213ENST00000580446 IGKV6-21A0A0C4DH24 114 aa15.72■□□□□ 0.11
CSNK1D-213ENST00000580446 WDR64B1ANS9 1081 aa15.72■□□□□ 0.11
CSNK1D-213ENST00000580446 MOSPD3O75425 235 aa15.72■□□□□ 0.11
CSNK1D-213ENST00000580446 POU2F2P09086 479 aa15.72■□□□□ 0.11
CSNK1D-213ENST00000580446 RAB33AQ14088 237 aa15.72■□□□□ 0.11
CSNK1D-213ENST00000580446 UVSSAQ2YD98 709 aa15.72■□□□□ 0.11
CSNK1D-213ENST00000580446 PRR16Q569H4 304 aa15.72■□□□□ 0.11
CSNK1D-213ENST00000580446 GPR65Q8IYL9 337 aa15.72■□□□□ 0.11
CSNK1D-213ENST00000580446 SLC39A7Q92504 469 aa15.72■□□□□ 0.11
CSNK1D-213ENST00000580446 CXCL16Q9H2A7 254 aa15.72■□□□□ 0.11
CSNK1D-213ENST00000580446 SLC32A1Q9H598 525 aa15.72■□□□□ 0.11
CSNK1D-213ENST00000580446 RAI2Q9Y5P3 530 aa15.72■□□□□ 0.11
CSNK1D-213ENST00000580446 SPAG17Q6Q759 2223 aa15.72■□□□□ 0.11
CSNK1D-213ENST00000580446 WDR81Q562E7 1941 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 MYBPHLA2RUH7 354 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 STBD1O95210 358 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 LRG1P02750 347 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 MYL4P12829 197 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 TNK2Q07912 1038 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 SART3Q15020 963 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 TEAD2Q15562 447 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms