RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 APOBEC2Q9Y235 224 aaKnown RBP16.08■□□□□ 0.17
ITGB4-206ENST00000579662 GOLGA8MH3BSY2 632 aa16.08■□□□□ 0.17
ITGB4-206ENST00000579662 LMBRD2Q68DH5 695 aaPredicted RBP16.08■□□□□ 0.17
ITGB4-206ENST00000579662 SPATA2LQ8IUW3 424 aaPredicted RBP16.08■□□□□ 0.17
ITGB4-206ENST00000579662 GIPC2Q8TF65 315 aa16.08■□□□□ 0.17
ITGB4-206ENST00000579662 MED15Q96RN5 788 aa16.08■□□□□ 0.17
ITGB4-206ENST00000579662 CSPG5O95196 566 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 OCRLQ01968 901 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 KCNH7Q9NS40 1196 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 TMEM131LA2VDJ0 1609 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 FGFR2P21802 821 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 HSD17B4P51659 736 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 NAB2Q15742 525 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 RBBP8NLQ8NC74 664 aaPredicted RBP16.08■□□□□ 0.16
ITGB4-206ENST00000579662 SPATA4Q8NEY3 305 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 GANCQ8TET4 914 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 UPF3AQ9H1J1 476 aaKnown RBP16.08■□□□□ 0.16
ITGB4-206ENST00000579662 PLEKHA5Q9HAU0 1116 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 PPLO60437 1756 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 RRN3P2A6NIE6 340 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 LCP1P13796 627 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 ACOT2P49753 483 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 KRT17Q04695 432 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 PIGHQ14442 188 aaPredicted RBP16.08■□□□□ 0.16
ITGB4-206ENST00000579662 TRAPPC11Q7Z392 1133 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 ZBED8Q8IZ13 594 aa16.08■□□□□ 0.16
ITGB4-206ENST00000579662 SPECC1L-ADORA2AF8WAN1 911 aa16.07■□□□□ 0.16
ITGB4-206ENST00000579662 DYNC1LI2O43237 492 aaPredicted RBP16.07■□□□□ 0.16
ITGB4-206ENST00000579662 LAMC2Q13753 1193 aa16.07■□□□□ 0.16
ITGB4-206ENST00000579662 TRIM33Q9UPN9 1127 aa16.07■□□□□ 0.16
ITGB4-206ENST00000579662 PSMD3O43242 534 aa16.07■□□□□ 0.16
ITGB4-206ENST00000579662 GYS1P13807 737 aa16.07■□□□□ 0.16
ITGB4-206ENST00000579662 ATF7IP2Q5U623 682 aa16.07■□□□□ 0.16
ITGB4-206ENST00000579662 SLC35G2Q8TBE7 412 aa16.07■□□□□ 0.16
ITGB4-206ENST00000579662 VPS11Q9H270 941 aa16.07■□□□□ 0.16
ITGB4-206ENST00000579662 SULT1E1P49888 294 aa16.07■□□□□ 0.16
ITGB4-206ENST00000579662 MAGOHP61326 146 aaKnown RBP16.07■□□□□ 0.16
ITGB4-206ENST00000579662 PPM1NQ8N819 430 aa16.07■□□□□ 0.16
ITGB4-206ENST00000579662 EXT2Q93063 718 aa16.07■□□□□ 0.16
ITGB4-206ENST00000579662 ELAC2Q9BQ52 826 aaKnown RBP16.07■□□□□ 0.16
ITGB4-206ENST00000579662 LMNAP02545 664 aaKnown RBP16.07■□□□□ 0.16
ITGB4-206ENST00000579662 MDM2Q00987 491 aaPredicted RBP16.07■□□□□ 0.16
ITGB4-206ENST00000579662 KRT33BQ14525 404 aa16.07■□□□□ 0.16
ITGB4-206ENST00000579662 FARP1Q9Y4F1 1045 aaPredicted RBP16.07■□□□□ 0.16
ITGB4-206ENST00000579662 CAP2P40123 477 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 STAT4Q14765 748 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 GMCL1P1Q8NEA9 526 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 AGBL1Q96MI9 1066 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 MRPL40Q9NQ50 206 aaKnown RBP16.06■□□□□ 0.16
ITGB4-206ENST00000579662 MST1RQ04912 1400 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 KBTBD13C9JR72 458 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 PHF2O75151 1096 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 ZNF157P51786 506 aaPredicted RBP16.06■□□□□ 0.16
ITGB4-206ENST00000579662 GALCP54803 685 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 EIF3EP60228 445 aaKnown RBP16.06■□□□□ 0.16
ITGB4-206ENST00000579662 CCZ1BP86790 482 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 CCZ1P86791 482 aaPredicted RBP16.06■□□□□ 0.16
ITGB4-206ENST00000579662 RAD51Q06609 339 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 SV2CQ496J9 727 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 C1orf54Q8WWF1 131 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 CCDC124Q96CT7 223 aaKnown RBP16.06■□□□□ 0.16
ITGB4-206ENST00000579662 ATG4CQ96DT6 458 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 ATP6V1G3Q96LB4 118 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 SENP1Q9P0U3 644 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 ARSEP51690 589 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 SNX9Q9Y5X1 595 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 MAP3K7O43318 606 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 KLRK1P26718 216 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 ACADSBP45954 432 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 TPI1P60174 286 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 DGKDQ16760 1214 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 PLA2G4FQ68DD2 849 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 PCDHB2Q9Y5E7 798 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 SALL1Q9NSC2 1324 aa16.06■□□□□ 0.16
ITGB4-206ENST00000579662 CCL15-CCL14A0A0B4J2E2 113 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 A0A0G2JND7 137 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 MOCS2O96007 188 aaPredicted RBP16.05■□□□□ 0.16
ITGB4-206ENST00000579662 PDCLQ13371 301 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 MTF1Q14872 753 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 CCL15Q16663 113 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 KIF19Q2TAC6 998 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 CATSPER3Q86XQ3 398 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 EHD2Q9NZN4 543 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 TMEM253P0C7T8 217 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 FGD4Q96M96 766 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 IL25Q9H293 177 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 ZBBXA8MT70 800 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 SNX17Q15036 470 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 EFHBQ8N7U6 833 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 POLLQ9UGP5 575 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 TAF6LQ9Y6J9 622 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 GRIK1P39086 918 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 CPT1AP50416 773 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 ZNF235Q14590 738 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 DDX27Q96GQ7 796 aaKnown RBP16.05■□□□□ 0.16
ITGB4-206ENST00000579662 GMCL1Q96IK5 515 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 PPP1R2P1Q96PQ5 205 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 PPARGC1AQ9UBK2 798 aaKnown RBP16.05■□□□□ 0.16
ITGB4-206ENST00000579662 TJP2Q9UDY2 1190 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms