RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 NTPCRQ9BSD7 190 aaKnown RBP12.68□□□□□ -0.38
SSH2-208ENST00000579040 TTPALQ9BTX7 342 aa12.68□□□□□ -0.38
SSH2-208ENST00000579040 CCDC94Q9BW85 323 aaPredicted RBP12.68□□□□□ -0.38
SSH2-208ENST00000579040 MRPL4Q9BYD3 311 aaKnown RBP12.68□□□□□ -0.38
SSH2-208ENST00000579040 POLD4Q9HCU8 107 aa12.68□□□□□ -0.38
SSH2-208ENST00000579040 KMT5AQ9NQR1 393 aa12.68□□□□□ -0.38
SSH2-208ENST00000579040 TOPORSQ9NS56 1045 aaPredicted RBP12.68□□□□□ -0.38
SSH2-208ENST00000579040 ZDHHC7Q9NXF8 308 aa12.68□□□□□ -0.38
SSH2-208ENST00000579040 USP20Q9Y2K6 914 aa12.68□□□□□ -0.38
SSH2-208ENST00000579040 CCDC195A0A1B0GUA6 201 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 VWA3AA6NCI4 1184 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 TGM5O43548 720 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 BRD1O95696 1058 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 YARSP54577 528 aaKnown RBP12.67□□□□□ -0.38
SSH2-208ENST00000579040 ZNF568Q3ZCX4 644 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 LARP1BQ659C4 914 aaKnown RBP12.67□□□□□ -0.38
SSH2-208ENST00000579040 LILRA6Q6PI73 481 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 TAS1R3Q7RTX0 852 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 BRAPQ7Z569 592 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 SYT2Q8N9I0 419 aaPredicted RBP12.67□□□□□ -0.38
SSH2-208ENST00000579040 SPIRE2Q8WWL2 714 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 RABGGTAQ92696 567 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 STAMQ92783 540 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 CDK5RAP3Q96JB5 506 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 B3GALT6Q96L58 329 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 PNMA5Q96PV4 448 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 CDT1Q9H211 546 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 PTPRHQ9HD43 1115 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 WDR6Q9NNW5 1121 aaKnown RBP12.67□□□□□ -0.38
SSH2-208ENST00000579040 CACNG4Q9UBN1 327 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 LIMD1Q9UGP4 676 aa12.67□□□□□ -0.38
SSH2-208ENST00000579040 CACNA1HO95180 2353 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 CLUHO75153 1309 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 H0YCG3 227 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 MCF2P10911 925 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 PLS3P13797 630 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 PROZP22891 400 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 SMTNP53814 917 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 STRN3Q13033 797 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 ZRSR1Q15695 479 aaKnown RBP12.66□□□□□ -0.38
SSH2-208ENST00000579040 PSMD5Q16401 504 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 TMEM119Q4V9L6 283 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 XKR4Q5GH76 650 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 RTP2Q5QGT7 225 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 FAM171A1Q5VUB5 890 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 PRSS55Q6UWB4 352 aaPredicted RBP12.66□□□□□ -0.38
SSH2-208ENST00000579040 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.66□□□□□ -0.38
SSH2-208ENST00000579040 PALB2Q86YC2 1186 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 FEZF2Q8TBJ5 459 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 HASPINQ8TF76 798 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 SMG7Q92540 1137 aaKnown RBP12.66□□□□□ -0.38
SSH2-208ENST00000579040 TARS2Q9BW92 718 aaKnown RBP12.66□□□□□ -0.38
SSH2-208ENST00000579040 CXCL16Q9H2A7 254 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 SLC38A7Q9NVC3 462 aa12.66□□□□□ -0.38
SSH2-208ENST00000579040 SMIM28A0A1B0GU29 152 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 ABLIM1O14639 778 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 SLC16A4O15374 487 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 TRAPPC3O43617 180 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 RFPL2O75678 378 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 ZMYND10O75800 440 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 ASGR2P07307 311 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 PLA2G4BP0C869 781 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 RPL17P18621 184 aaKnown RBP12.65□□□□□ -0.38
SSH2-208ENST00000579040 PDCP20941 246 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 SCP2P22307 547 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 NUBP1P53384 320 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 SLC12A3P55017 1021 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 NHLH1Q02575 133 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 GLRA4Q5JXX5 417 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 DCLRE1AQ6PJP8 1040 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 MPZL3Q6UWV2 235 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 ALKAL1Q6UXT8 129 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 CEP57Q86XR8 500 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 GLYCTKQ8IVS8 523 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 TMEM161BQ8NDZ6 487 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 LNX1Q8TBB1 728 aaPredicted RBP12.65□□□□□ -0.38
SSH2-208ENST00000579040 KCNN1Q92952 543 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 ZNF707Q96C28 371 aaPredicted RBP12.65□□□□□ -0.38
SSH2-208ENST00000579040 DDX27Q96GQ7 796 aaKnown RBP12.65□□□□□ -0.38
SSH2-208ENST00000579040 SNX27Q96L92 541 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 CLSTN3Q9BQT9 956 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 PRKD2Q9BZL6 878 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 IGSF9Q9P2J2 1179 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 LARSQ9P2J5 1176 aaKnown RBP12.65□□□□□ -0.38
SSH2-208ENST00000579040 FBXW11Q9UKB1 542 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 ODF2LQ9ULJ1 636 aa12.65□□□□□ -0.38
SSH2-208ENST00000579040 TOM1L1O75674 476 aa12.64□□□□□ -0.39
SSH2-208ENST00000579040 B3GAT3O94766 335 aa12.64□□□□□ -0.39
SSH2-208ENST00000579040 HNRNPA1P09651 372 aaKnown RBP eCLIP12.64□□□□□ -0.39
SSH2-208ENST00000579040 SPATA31D3P0C874 917 aa12.64□□□□□ -0.39
SSH2-208ENST00000579040 KCNE1P15382 129 aa12.64□□□□□ -0.39
SSH2-208ENST00000579040 FGFR3P22607 806 aa12.64□□□□□ -0.39
SSH2-208ENST00000579040 HOXA9P31269 272 aa12.64□□□□□ -0.39
SSH2-208ENST00000579040 LONP1P36776 959 aaKnown RBP12.64□□□□□ -0.39
SSH2-208ENST00000579040 UBA7P41226 1012 aa12.64□□□□□ -0.39
SSH2-208ENST00000579040 PTPN5P54829 565 aa12.64□□□□□ -0.39
SSH2-208ENST00000579040 TDGQ13569 410 aa12.64□□□□□ -0.39
SSH2-208ENST00000579040 CUL4AQ13619 759 aa12.64□□□□□ -0.39
SSH2-208ENST00000579040 NOLC1Q14978 699 aaKnown RBP eCLIP12.64□□□□□ -0.39
SSH2-208ENST00000579040 UPP1Q16831 310 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms