RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 C2orf40Q9H1Z8 148 aa9.85□□□□□ -0.83
GGA3-207ENST00000578896 DDX19AQ9NUU7 478 aaKnown RBP9.85□□□□□ -0.83
GGA3-207ENST00000578896 FNIP2Q9P278 1114 aa9.85□□□□□ -0.83
GGA3-207ENST00000578896 LRWD1Q9UFC0 647 aa9.85□□□□□ -0.83
GGA3-207ENST00000578896 PCDHB6Q9Y5E3 794 aa9.85□□□□□ -0.83
GGA3-207ENST00000578896 CITO14578 2027 aa9.85□□□□□ -0.83
GGA3-207ENST00000578896 MYH11P35749 1972 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 SF3B1O75533 1304 aaKnown RBP eCLIP9.84□□□□□ -0.83
GGA3-207ENST00000578896 CCDC169A6NNP5 214 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 SFI1A8K8P3 1242 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 ZMYND10O75800 440 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 LAMP2P13473 410 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 BRCC3P46736 316 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 RBM25P49756 843 aaKnown RBP9.84□□□□□ -0.83
GGA3-207ENST00000578896 CLCN5P51795 746 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 CLCNKBP51801 687 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 PEX3P56589 373 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 PTGDRQ13258 359 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 ATF7IP2Q5U623 682 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 CD300LGQ6UXG3 332 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 KCNK18Q7Z418 384 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 GPR152Q8TDT2 470 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 SNX29Q8TEQ0 813 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 STAMQ92783 540 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 IFT74Q96LB3 600 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 PLIN2Q99541 437 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 LLPHQ9BRT6 129 aaKnown RBP9.84□□□□□ -0.83
GGA3-207ENST00000578896 PLEKHA4Q9H4M7 779 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.84□□□□□ -0.83
GGA3-207ENST00000578896 IGSF9Q9P2J2 1179 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 EPS15L1Q9UBC2 864 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 FBXW11Q9UKB1 542 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 POLIQ9UNA4 740 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 MYH15Q9Y2K3 1946 aa9.84□□□□□ -0.83
GGA3-207ENST00000578896 COL4A3Q01955 1670 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 K7ERI5 159 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 HIP1RO75146 1068 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 B3GAT3O94766 335 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 C8AP07357 584 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 HARSP12081 509 aaKnown RBP9.83□□□□□ -0.84
GGA3-207ENST00000578896 AOC1P19801 751 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 FSHRP23945 695 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 TKTP29401 623 aaKnown RBP9.83□□□□□ -0.84
GGA3-207ENST00000578896 OR1D2P34982 312 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 FXR2P51116 673 aaKnown RBP eCLIP9.83□□□□□ -0.84
GGA3-207ENST00000578896 SOX4Q06945 474 aaPredicted RBP9.83□□□□□ -0.84
GGA3-207ENST00000578896 RAD51AP2Q09MP3 1159 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 SEZ6Q53EL9 994 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 SPECC1Q5M775 1068 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 HAUS3Q68CZ6 603 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 ELMSAN1Q6PJG2 1045 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 PARM1Q6UWI2 310 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 TAS1R3Q7RTX0 852 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 DAW1Q8N136 415 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 C3orf58Q8NDZ4 430 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 ITFG1Q8TB96 612 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 HDAC7Q8WUI4 952 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 PIK3R5Q8WYR1 880 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 ZBTB45Q96K62 511 aaPredicted RBP9.83□□□□□ -0.84
GGA3-207ENST00000578896 ADPGKQ9BRR6 497 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 RUSC1Q9BVN2 902 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 TARS2Q9BW92 718 aaKnown RBP9.83□□□□□ -0.84
GGA3-207ENST00000578896 HCFC1R1Q9NWW0 138 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 ZDHHC7Q9NXF8 308 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 DPP7Q9UHL4 492 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 NOL7Q9UMY1 257 aaKnown RBP9.83□□□□□ -0.84
GGA3-207ENST00000578896 NUMBLQ9Y6R0 609 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 SPTBN2O15020 2390 aa9.83□□□□□ -0.84
GGA3-207ENST00000578896 OTOGLQ3ZCN5 2332 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 CEP250Q9BV73 2442 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 SMIM28A0A1B0GU29 152 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 MEFVO15553 781 aaPredicted RBP9.82□□□□□ -0.84
GGA3-207ENST00000578896 ST18O60284 1047 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 LRRN2O75325 713 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 DCNP07585 359 aaKnown RBP9.82□□□□□ -0.84
GGA3-207ENST00000578896 FGFR3P22607 806 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 RFX1P22670 979 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 NPTX2P47972 431 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 GPC5P78333 572 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 HMGN5P82970 282 aaKnown RBP9.82□□□□□ -0.84
GGA3-207ENST00000578896 HTR4Q13639 388 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 PPP2R5AQ15172 486 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 DCAF4L1Q3SXM0 396 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 PPM1LQ5SGD2 360 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 AXDND1Q5T1B0 1012 aaPredicted RBP9.82□□□□□ -0.84
GGA3-207ENST00000578896 LIN9Q5TKA1 542 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 CYP26C1Q6V0L0 522 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 DTWD2Q8NBA8 298 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 SLC7A14Q8TBB6 771 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 ING5Q8WYH8 240 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 KIFAP3Q92845 792 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 FGF14Q92915 247 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 ZSCAN31Q96LW9 406 aaPredicted RBP9.82□□□□□ -0.84
GGA3-207ENST00000578896 ZMAT2Q96NC0 199 aaKnown RBP9.82□□□□□ -0.84
GGA3-207ENST00000578896 PPP1R10Q96QC0 940 aaKnown RBP9.82□□□□□ -0.84
GGA3-207ENST00000578896 ACO2Q99798 780 aaKnown RBP9.82□□□□□ -0.84
GGA3-207ENST00000578896 MMTAG2Q9BU76 263 aaKnown RBP9.82□□□□□ -0.84
GGA3-207ENST00000578896 IRF2BPLQ9H1B7 796 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 CDT1Q9H211 546 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 TBC1D17Q9HA65 648 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms