RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 HELQQ8TDG4 1101 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 TAS1R2Q8TE23 839 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 AFG1LQ8WV93 481 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 HNRNPLLQ8WVV9 542 aaKnown RBP11.97□□□□□ -0.49
SKA2-204ENST00000578519 SOCS4Q8WXH5 440 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 COPS5Q92905 334 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 NLRP4Q96MN2 994 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 NAP1L3Q99457 506 aaPredicted RBP11.97□□□□□ -0.49
SKA2-204ENST00000578519 ADPGKQ9BRR6 497 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 PARD6BQ9BYG5 372 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 CCDC113Q9H0I3 377 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 AP5M1Q9H0R1 490 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 ISCUQ9H1K1 167 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 TUT1Q9H6E5 874 aaKnown RBP11.97□□□□□ -0.49
SKA2-204ENST00000578519 RPF1Q9H9Y2 349 aaKnown RBP11.97□□□□□ -0.49
SKA2-204ENST00000578519 ZHX1Q9UKY1 873 aaPredicted RBP11.97□□□□□ -0.49
SKA2-204ENST00000578519 NENFQ9UMX5 172 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 AKT3Q9Y243 479 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 TNFSF13BQ9Y275 285 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 Q9Y3F1 56 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 PCDHB2Q9Y5E7 798 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 CAPN6Q9Y6Q1 641 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 LCTP09848 1927 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 NCANO14594 1321 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 ADGRA2Q96PE1 1338 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 KPNA6O60684 536 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 C22orf31O95567 290 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 SNAI1O95863 264 aaPredicted RBP11.96□□□□□ -0.49
SKA2-204ENST00000578519 TMEM191BP0C7N4 346 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 MYBL1P10243 752 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 MCF2P10911 925 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 KRT5P13647 590 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 ADCYAP1R1P41586 468 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 ACOT2P49753 483 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 NLRP11P59045 1033 aaKnown RBP11.96□□□□□ -0.49
SKA2-204ENST00000578519 CDR2Q01850 454 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 PPFIA1Q13136 1202 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 NAA30Q147X3 362 aaPredicted RBP11.96□□□□□ -0.49
SKA2-204ENST00000578519 SGSM1Q2NKQ1 1148 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 ZNF568Q3ZCX4 644 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 CD302Q8IX05 232 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 LRRC71Q8N4P6 559 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 TPCN2Q8NHX9 752 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 CAPZA3Q96KX2 299 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 SCLT1Q96NL6 688 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 KATNAL1Q9BW62 490 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 CCDC94Q9BW85 323 aaPredicted RBP11.96□□□□□ -0.49
SKA2-204ENST00000578519 GPR88Q9GZN0 384 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 PDE11AQ9HCR9 933 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 OGFRQ9NZT2 677 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 LCMT1Q9UIC8 334 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 AJAP1Q9UKB5 411 aaPredicted RBP11.96□□□□□ -0.49
SKA2-204ENST00000578519 TFR2Q9UP52 801 aa11.96□□□□□ -0.49
SKA2-204ENST00000578519 ARID2Q68CP9 1835 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 TMCO5BA8MYB1 307 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 MIF4GDA9UHW6 222 aaKnown RBP11.95□□□□□ -0.5
SKA2-204ENST00000578519 ZBTB42B2RXF5 422 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 ERLIN2O94905 339 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 FTLP02792 175 aaPredicted RBP11.95□□□□□ -0.5
SKA2-204ENST00000578519 CLTAP09496 248 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 GNAT1P11488 350 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 HARSP12081 509 aaKnown RBP11.95□□□□□ -0.5
SKA2-204ENST00000578519 HOXD8P13378 290 aaPredicted RBP11.95□□□□□ -0.5
SKA2-204ENST00000578519 P4HA1P13674 534 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 CPT1AP50416 773 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 TNNC1P63316 161 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 IGBP1P78318 339 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 LIN9Q5TKA1 542 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 OLFML2BQ68BL8 750 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 WDR93Q6P2C0 686 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 FBXO38Q6PIJ6 1188 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 MTHFD1LQ6UB35 978 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 CRELD2Q6UXH1 353 aaPredicted RBP11.95□□□□□ -0.5
SKA2-204ENST00000578519 DAAM2Q86T65 1068 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 TRIM50Q86XT4 487 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 NT5DC4Q86YG4 428 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 RASAL3Q86YV0 1011 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 GPIHBP1Q8IV16 184 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 TTC39CQ8N584 583 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 UBL4BQ8N7F7 174 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 LNX1Q8TBB1 728 aaPredicted RBP11.95□□□□□ -0.5
SKA2-204ENST00000578519 SEMA4DQ92854 862 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 ZBTB45Q96K62 511 aaPredicted RBP11.95□□□□□ -0.5
SKA2-204ENST00000578519 POP1Q99575 1024 aaKnown RBP11.95□□□□□ -0.5
SKA2-204ENST00000578519 SYT11Q9BT88 431 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 PLVAPQ9BX97 442 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 TLR10Q9BXR5 811 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 DNAI2Q9GZS0 605 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 FAM124BQ9H5Z6 455 aaPredicted RBP11.95□□□□□ -0.5
SKA2-204ENST00000578519 CTTNBP2NLQ9P2B4 639 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 UVRAGQ9P2Y5 699 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 HDAC6Q9UBN7 1215 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 RAB21Q9UL25 225 aa11.95□□□□□ -0.5
SKA2-204ENST00000578519 NRCAMQ92823 1304 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 CYP26A1O43174 497 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 B4GALT4O60513 344 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 KIF4AO95239 1232 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 SGPL1O95470 568 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 ITGBL1O95965 494 aaPredicted RBP11.94□□□□□ -0.5
SKA2-204ENST00000578519 ALDH1A1P00352 501 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms