RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 TNS4Q8IZW8 715 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 USP38Q8NB14 1042 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 CAGE1Q8TC20 777 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 NOC3LQ8WTT2 800 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 PPP1R13LQ8WUF5 828 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 NLRP4Q96MN2 994 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 DUSP9Q99956 384 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 KIFC3Q9BVG8 833 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 CELF4Q9BZC1 486 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 FAM49AQ9H0Q0 323 aaPredicted RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 TRPV6Q9H1D0 765 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 TRMT13Q9NUP7 481 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 PRMT7Q9NVM4 692 aaPredicted RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 DMAC2Q9NW81 257 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 DOCK5Q9H7D0 1870 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 FSD2A1L4K1 749 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 LRRC10BA6NIK2 292 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 BECN2A8MW95 431 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 KIAA0391O15091 583 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 CALUO43852 315 aaPredicted RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 FGFR1OPO95684 399 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 CHRNA1P02708 482 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 IQCF3P0C7M6 154 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 GARTP22102 1010 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 RPL13P26373 211 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 PMS1P54277 932 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 NCBP1Q09161 790 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 NAA30Q147X3 362 aaPredicted RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 KIZQ2M2Z5 673 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 SLFN12LQ6IEE8 588 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 CYP2U1Q7Z449 544 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 FILIP1Q7Z7B0 1213 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 NELFCDQ8IXH7 590 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 CCDC116Q8IYX3 515 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 SYCP3Q8IZU3 236 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 DHX38Q92620 1227 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 WNT8BQ93098 351 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 PAWRQ96IZ0 340 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 CEP63Q96MT8 703 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 TSG101Q99816 390 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 MRPL4Q9BYD3 311 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 RBSNQ9H1K0 784 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 C11orf49Q9H6J7 331 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 MINDY3Q9H8M7 445 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 PTPRHQ9HD43 1115 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 AGPAT3Q9NRZ7 376 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 IGSF5Q9NSI5 407 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 A0A1B0GUA9 196 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 DCDC2CA8MYV0 355 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 INO80B-WBP1J3KQ70 363 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 M0QZ92 97 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 TLR3O15455 904 aaKnown RBP8.75□□□□□ -1.01
COPS3-215ENST00000578317 TOM1L1O75674 476 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 GNA14O95837 355 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 PRKCBP05771 671 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 CKBP12277 381 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 ZNF18P17022 549 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 PROZP22891 400 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 ADSSP30520 456 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 AXLP30530 894 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 THPOP40225 353 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 EPHA4P54764 986 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 POU5F1Q01860 360 aaKnown RBP8.75□□□□□ -1.01
COPS3-215ENST00000578317 NNTQ13423 1086 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 ADAM9Q13443 819 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 BFSP2Q13515 415 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 HSP90AA2PQ14568 343 aaPredicted RBP8.75□□□□□ -1.01
COPS3-215ENST00000578317 CSGALNACT2Q8N6G5 542 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 CCDC155Q8N6L0 562 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 ACO2Q99798 780 aaKnown RBP8.75□□□□□ -1.01
COPS3-215ENST00000578317 HSD3B7Q9H2F3 369 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 THAP9Q9H5L6 903 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.75□□□□□ -1.01
COPS3-215ENST00000578317 CTNND2Q9UQB3 1225 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 TNFSF13BQ9Y275 285 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 NFE2L3Q9Y4A8 694 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 TRPV2Q9Y5S1 764 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 ZMYM2Q9UBW7 1377 aa8.75□□□□□ -1.01
COPS3-215ENST00000578317 MYH9P35579 1960 aaKnown RBP8.74□□□□□ -1.01
COPS3-215ENST00000578317 LOXHD1Q8IVV2 1947 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 A0A0B4J269 797 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 ANKRD63C9JTQ0 380 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 GOLGA6L19H0YKK7 550 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 CETN3O15182 167 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 MAPK13O15264 365 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 PARNO95453 639 aaKnown RBP8.74□□□□□ -1.01
COPS3-215ENST00000578317 STX17P56962 302 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 TLE2Q04725 743 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 ENPEPQ07075 957 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 MCL1Q07820 350 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 FAAP100Q0VG06 881 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 PRPF4BQ13523 1007 aaKnown RBP8.74□□□□□ -1.01
COPS3-215ENST00000578317 PPP1R26Q5T8A7 1209 aaPredicted RBP8.74□□□□□ -1.01
COPS3-215ENST00000578317 CDKAL1Q5VV42 579 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 SLC39A4Q6P5W5 647 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 LRRC55Q6ZSA7 311 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 LUZP1Q86V48 1076 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 IRF2BP1Q8IU81 584 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 CYP4X1Q8N118 509 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 AOPEPQ8N6M6 819 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms