RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 GLRA4Q5JXX5 417 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 RINT1Q6NUQ1 792 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 TMX3Q96JJ7 454 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 DRC1Q96MC2 740 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 RHOBTB2Q9BYZ6 727 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 NT5C3AQ9H0P0 336 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 MFSD1Q9H3U5 465 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 UPF2Q9HAU5 1272 aaKnown RBP16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 KCNK12Q9HB15 430 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 KMT5AQ9NQR1 393 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 ZDHHC7Q9NXF8 308 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 TNFSF13BQ9Y275 285 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 PHLPP2Q6ZVD8 1323 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 GJB2P29033 226 aa16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 YARSP54577 528 aaKnown RBP16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 TCF15Q12870 199 aa16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 TDGQ13569 410 aa16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 PSMD5Q16401 504 aa16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 ZNF568Q3ZCX4 644 aa16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 LILRA6Q6PI73 481 aa16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 DAW1Q8N136 415 aa16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 PIK3R5Q8WYR1 880 aa16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 ZNF707Q96C28 371 aaPredicted RBP16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 MMTAG2Q9BU76 263 aaKnown RBP16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 RUSC1Q9BVN2 902 aa16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 CCDC94Q9BW85 323 aaPredicted RBP16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 MRPL4Q9BYD3 311 aaKnown RBP16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 TMEM134Q9H6X4 195 aa16.41■□□□□ 0.22
RN7SL560P-201ENST00000577943 N4BP1O75113 896 aaKnown RBP16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 OSTNP61366 133 aa16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 ATP2C1P98194 919 aaPredicted RBP16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 PDXDC1Q6P996 788 aa16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 C1orf186Q6ZWK4 172 aa16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 KCNK18Q7Z418 384 aa16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 LNX1Q8TBB1 728 aaPredicted RBP16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 PHOX2BQ99453 314 aa16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 ACO2Q99798 780 aaKnown RBP16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 CLSTN3Q9BQT9 956 aa16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 PRKD2Q9BZL6 878 aa16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 CDT1Q9H211 546 aa16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 C17orf75Q9HAS0 396 aa16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 TOPORSQ9NS56 1045 aaPredicted RBP16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 IGSF9Q9P2J2 1179 aa16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 ARHGAP28Q9P2N2 729 aa16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 DUSP12Q9UNI6 340 aa16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 RBM19Q9Y4C8 960 aaKnown RBP16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 CACNA1HO95180 2353 aa16.4■□□□□ 0.22
RN7SL560P-201ENST00000577943 MYH15Q9Y2K3 1946 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 VWA3AA6NCI4 1184 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 SFI1A8K8P3 1242 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 SLC16A4O15374 487 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 ZMYND10O75800 440 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 B3GAT3O94766 335 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 CD2BP2O95400 341 aaKnown RBP16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 GRM5P41594 1212 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 CLCNKBP51801 687 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 NUBP1P53384 320 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 RAD51AP2Q09MP3 1159 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 MAPK7Q13164 816 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 LIN9Q5TKA1 542 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 ASTLQ6HA08 431 aaPredicted RBP16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 DCLRE1AQ6PJP8 1040 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 CEP120Q8N960 986 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 CDK5RAP3Q96JB5 506 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 UROC1Q96N76 676 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 PPP1R10Q96QC0 940 aaKnown RBP16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 MYADMQ96S97 322 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 PLIN2Q99541 437 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 TCHPQ9BT92 498 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 TIPINQ9BVW5 301 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 TARS2Q9BW92 718 aaKnown RBP16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 IRF2BPLQ9H1B7 796 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 FBXW11Q9UKB1 542 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 FBXL21Q9UKT6 434 aa16.39■□□□□ 0.21
RN7SL560P-201ENST00000577943 SMIM28A0A1B0GU29 152 aa16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 TMEM189-UBE2V1I3L0A0 370 aa16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 PAPLNO95428 1278 aa16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 GUCY2CP25092 1073 aa16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 PPM1LQ5SGD2 360 aa16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 HYIQ5T013 277 aa16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 GET4Q7L5D6 327 aaPredicted RBP16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 TAS1R3Q7RTX0 852 aa16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 TMEM105Q8N8V8 129 aa16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 RSAD2Q8WXG1 361 aa16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 GOLGA2P5Q9HBQ8 144 aa16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 EPS15L1Q9UBC2 864 aa16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 SMC3Q9UQE7 1217 aa16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 NOTCH4Q99466 2003 aa16.38■□□□□ 0.21
RN7SL560P-201ENST00000577943 GALR2O43603 387 aaPredicted RBP16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 TRAPPC3O43617 180 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 MCM2P49736 904 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 SMTNP53814 917 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 STRN3Q13033 797 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 UPP1Q16831 310 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 ARL6IP4Q66PJ3 421 aaKnown RBP16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 MPZL3Q6UWV2 235 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 KCTD17Q8N5Z5 321 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 SYT2Q8N9I0 419 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms