RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PPM1EQ8WY54 764 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 CLP1Q92989 425 aaKnown RBP8.64□□□□□ -1.03
CCDC40-215ENST00000576033 CCDC51Q96ER9 411 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 TGS1Q96RS0 853 aaKnown RBP8.64□□□□□ -1.03
CCDC40-215ENST00000576033 TCHPQ9BT92 498 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 TSPY26PQ9H489 355 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 MAGEF1Q9HAY2 307 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 PRDM6Q9NQX0 595 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 A0A0B4J269 797 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 I3L4J1 428 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 TOM1L1O75674 476 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 KIF4AO95239 1232 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 EOMESO95936 686 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 ADRB2P07550 413 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 NFICP08651 508 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 MCF2P10911 925 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 CD44P16070 742 aaKnown RBP8.63□□□□□ -1.03
CCDC40-215ENST00000576033 IGFBP4P22692 258 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 GTF2F1P35269 517 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCDC40-215ENST00000576033 GRM5P41594 1212 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 CYP2J2P51589 502 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 RBM10P98175 930 aaKnown RBP8.63□□□□□ -1.03
CCDC40-215ENST00000576033 GPM6BQ13491 265 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 PCBP1Q15365 356 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCDC40-215ENST00000576033 CCDC85BQ15834 202 aaPredicted RBP8.63□□□□□ -1.03
CCDC40-215ENST00000576033 SLC10A6Q3KNW5 377 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 DCAF4L1Q3SXM0 396 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 ZPBP2Q6X784 338 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 TAS1R1Q7RTX1 841 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 ADGRD2Q7Z7M1 963 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 EFCAB13Q8IY85 973 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 ELOA2Q8IYF1 753 aaPredicted RBP8.63□□□□□ -1.03
CCDC40-215ENST00000576033 COLGALT2Q8IYK4 626 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 SLC39A11Q8N1S5 342 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 C3orf58Q8NDZ4 430 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 POMGNT1Q8WZA1 660 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 ELMO3Q96BJ8 720 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 PGBD4Q96DM1 585 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 FAM212AQ96EL1 285 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 EEF2KMTQ96G04 330 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 TIGD1Q96MW7 591 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 ACCSQ96QU6 501 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 ADPGKQ9BRR6 497 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 MSTO1Q9BUK6 570 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 ST6GALNAC4Q9H4F1 302 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 AGPAT3Q9NRZ7 376 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 SEL1LQ9UBV2 794 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 MAN1B1Q9UKM7 699 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 PCDHA5Q9Y5H7 936 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 SCN1AP35498 2009 aa8.63□□□□□ -1.03
CCDC40-215ENST00000576033 BRWD1Q9NSI6 2320 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 TRIM49BA6NDI0 452 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 LACTBL1A8MY62 500 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 NRP1O14786 923 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 CLDN3O15551 220 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 KINO60870 393 aaKnown RBP8.62□□□□□ -1.03
CCDC40-215ENST00000576033 FGF18O76093 207 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 RHOBTB3O94955 611 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 GALTP07902 379 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 FOSL2P15408 326 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 BMPR1AP36894 532 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 OR1G1P47890 313 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 PMS1P54277 932 aaKnown RBP8.62□□□□□ -1.03
CCDC40-215ENST00000576033 ERVFC1P60507 584 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 AMPD3Q01432 767 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 RNASELQ05823 741 aaKnown RBP8.62□□□□□ -1.03
CCDC40-215ENST00000576033 DSC1Q08554 894 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 NCBP1Q09161 790 aaKnown RBP8.62□□□□□ -1.03
CCDC40-215ENST00000576033 UVSSAQ2YD98 709 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 KCNT2Q6UVM3 1135 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 CBWD2Q8IUF1 395 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 SYCP3Q8IZU3 236 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 ZNF507Q8TCN5 953 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 URGCPQ8TCY9 931 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 PLEKHO2Q8TD55 490 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 KCNN1Q92952 543 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 PDLIM2Q96JY6 352 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 PPP1R10Q96QC0 940 aaKnown RBP8.62□□□□□ -1.03
CCDC40-215ENST00000576033 RPS6KC1Q96S38 1066 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 PPP1R9BQ96SB3 815 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 FAM213AQ9BRX8 229 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 KCTD10Q9H3F6 313 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 TOPORSQ9NS56 1045 aaPredicted RBP8.62□□□□□ -1.03
CCDC40-215ENST00000576033 USP25Q9UHP3 1055 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 CPSF3Q9UKF6 684 aaKnown RBP8.62□□□□□ -1.03
CCDC40-215ENST00000576033 GIT1Q9Y2X7 761 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 MTCH2Q9Y6C9 303 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 STYXL1Q9Y6J8 313 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 MUC3AQ02505 3323 aa8.62□□□□□ -1.03
CCDC40-215ENST00000576033 TMEM265A0A087WTH1 108 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 SMIM28A0A1B0GU29 152 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 PVALEFA0A1B0GWK0 134 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 HIDE1A8MVS5 230 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 C5orf67F2Z3F1 127 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 H0YCG3 227 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 H3BNC9 293 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 OGTO15294 1046 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 INPPL1O15357 1258 aa8.61□□□□□ -1.03
CCDC40-215ENST00000576033 EIF3DO15371 548 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCDC40-215ENST00000576033 LINC01565O15544 149 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms