RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	PPP1R10	Q96QC0	940 aa	Known RBP	27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	SLC38A7	Q9NVC3	462 aa		27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	CNTN3	Q9P232	1028 aa		27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	ADAM28	Q9UKQ2	775 aa		27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	EXOC7	Q9UPT5	735 aa		27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	CIT	O14578	2027 aa		27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	SMIM28	A0A1B0GU29	152 aa		27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	PER2	O15055	1255 aa		27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	TBX10	O75333	385 aa		27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	EFEMP2	O95967	443 aa		27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	CLTA	P09496	248 aa		27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	BMP1	P13497	986 aa		27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	KCNE1	P15382	129 aa		27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	CA8	P35219	290 aa		27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	SLFN12L	Q6IEE8	588 aa		27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	TMEM87A	Q8NBN3	555 aa		27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	STAM	Q92783	540 aa		27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	STRA6	Q9BX79	667 aa		27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	FAM50B	Q9Y247	325 aa		27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	PCDHB13	Q9Y5F0	798 aa		27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	27.64	■■■□□ 2.02
SRRM2-223	ENST00000575701	BRWD1	Q9NSI6	2320 aa		27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701	CASTOR2	A6NHX0	329 aa		27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701		H3BQ06	376 aa	Predicted RBP	27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701	OGT	O15294	1046 aa		27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701	LINC01565	O15544	149 aa		27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701	GCNT3	O95395	438 aa		27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701	UROD	P06132	367 aa		27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701	PTPN14	Q15678	1187 aa		27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701	GLRA4	Q5JXX5	417 aa		27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701	CEP57L1	Q8IYX8	460 aa		27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701	C7orf25	Q9BPX7	421 aa		27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701	CXCL16	Q9H2A7	254 aa		27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701	PLEKHA5	Q9HAU0	1116 aa		27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701	MRPL17	Q9NRX2	175 aa	Known RBP	27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701	USP25	Q9UHP3	1055 aa		27.63	■■■□□ 2.01
SRRM2-223	ENST00000575701	XIRP2	A4UGR9	3374 aa		27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701		A0A0B4J269	797 aa		27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701	ASIC1	P78348	528 aa		27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701	COASY	Q13057	564 aa		27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701	L1TD1	Q5T7N2	865 aa	Known RBP	27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701	FUT10	Q6P4F1	479 aa		27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701	TMEM184A	Q6ZMB5	413 aa		27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701	STXBP4	Q6ZWJ1	553 aa		27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701	GPR65	Q8IYL9	337 aa		27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701	ACCS	Q96QU6	501 aa		27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701	MSTO1	Q9BUK6	570 aa		27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701	HAPLN2	Q9GZV7	340 aa		27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701	TCHH	Q07283	1943 aa		27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701	SF3B1	O75533	1304 aa	Known RBP eCLIP	27.62	■■■□□ 2.01	6e-8	■■■■□ 25.3
SRRM2-223	ENST00000575701	SPTBN5	Q9NRC6	3674 aa	Known RBP	27.62	■■■□□ 2.01
SRRM2-223	ENST00000575701	TADA2A	O75478	443 aa		27.61	■■■□□ 2.01
SRRM2-223	ENST00000575701	GLP2R	O95838	553 aa		27.61	■■■□□ 2.01
SRRM2-223	ENST00000575701	PFKFB1	P16118	471 aa		27.61	■■■□□ 2.01
SRRM2-223	ENST00000575701	GLUD2	P49448	558 aa		27.61	■■■□□ 2.01
SRRM2-223	ENST00000575701	ELAVL2	Q12926	359 aa	Known RBP	27.61	■■■□□ 2.01
SRRM2-223	ENST00000575701	KCNC3	Q14003	757 aa		27.61	■■■□□ 2.01
SRRM2-223	ENST00000575701	SLC39A4	Q6P5W5	647 aa		27.61	■■■□□ 2.01
SRRM2-223	ENST00000575701	CHAMP1	Q96JM3	812 aa		27.61	■■■□□ 2.01
SRRM2-223	ENST00000575701	COL25A1	Q9BXS0	654 aa	Predicted RBP	27.61	■■■□□ 2.01
SRRM2-223	ENST00000575701	EMILIN2	Q9BXX0	1053 aa		27.61	■■■□□ 2.01
SRRM2-223	ENST00000575701	TBC1D7	Q9P0N9	293 aa		27.61	■■■□□ 2.01
SRRM2-223	ENST00000575701	STYXL1	Q9Y6J8	313 aa		27.61	■■■□□ 2.01
SRRM2-223	ENST00000575701	TRIP11	Q15643	1979 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	TMEM189-UBE2V1	I3L0A0	370 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	SLFN14	P0C7P3	912 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	DLX2	Q07687	328 aa	Predicted RBP	27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	POSTN	Q15063	836 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	SLC10A6	Q3KNW5	377 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	PTCRA	Q6ISU1	281 aa	Predicted RBP	27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	PPFIBP1	Q86W92	1011 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	ADAMTS19	Q8TE59	1207 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	AUTS2	Q8WXX7	1259 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	CASP10	Q92851	521 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	DDX27	Q96GQ7	796 aa	Known RBP	27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	MSLNL	Q96KJ4	702 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	TSPAN18	Q96SJ8	248 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	PAAF1	Q9BRP4	392 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	CLEC1B	Q9P126	229 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	CD207	Q9UJ71	328 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	HPSE	Q9Y251	543 aa		27.6	■■■□□ 2.01
SRRM2-223	ENST00000575701	FAM237A	A0A1B0GTK4	181 aa		27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701		A0A1W2PQ27	194 aa		27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701		A0A1W2PQ64	194 aa		27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701		A0A1W2PQD8	194 aa		27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701		F8W810	466 aa		27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701	FAM189A1	O60320	539 aa		27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701	CLASP2	O75122	1294 aa	Known RBP	27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701	KIF4A	O95239	1232 aa		27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701	DSG1	Q02413	1049 aa		27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701	PPP2R3A	Q06190	1150 aa		27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701	USP41	Q3LFD5	358 aa		27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701	SEZ6	Q53EL9	994 aa		27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701	KIAA1841	Q6NSI8	718 aa		27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701	TMEM206	Q9H813	350 aa		27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701	CHST7	Q9NS84	486 aa		27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701	PDCD11	Q14690	1871 aa	Known RBP	27.59	■■■□□ 2.01
SRRM2-223	ENST00000575701		A0A1B0GVL5	298 aa		27.58	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms