RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 MGEA5O60502 916 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 EOMESO95936 686 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 TNNI1P19237 187 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 CCL23P55773 120 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 OSTNP61366 133 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 DLG4P78352 724 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 FAM189BP81408 668 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 XKR4Q5GH76 650 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 COL13A1Q5TAT6 717 aaPredicted RBP12.9□□□□□ -0.34
PRPF8-212ENST00000575116 KRT39Q6A163 491 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 ALKAL1Q6UXT8 129 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 SLC24A5Q71RS6 500 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 VSTM4Q8IW00 320 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 TMEM192Q8IY95 271 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 DBF4BQ8NFT6 615 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 CACTINQ8WUQ7 758 aaKnown RBP12.9□□□□□ -0.34
PRPF8-212ENST00000575116 TRIM43Q96BQ3 446 aaPredicted RBP12.9□□□□□ -0.34
PRPF8-212ENST00000575116 CCDC127Q96BQ5 260 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 IQCDQ96DY2 449 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 HTATIP2Q9BUP3 242 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 TSPYL2Q9H2G4 693 aaPredicted RBP12.9□□□□□ -0.34
PRPF8-212ENST00000575116 TMEM8AQ9HCN3 771 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 SNTG2Q9NY99 539 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 TANC1Q9C0D5 1861 aa12.9□□□□□ -0.34
PRPF8-212ENST00000575116 ITIH6Q6UXX5 1313 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 LACTBL1A8MY62 500 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 C9IYK1 514 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 C4BPAP04003 597 aaKnown RBP12.89□□□□□ -0.35
PRPF8-212ENST00000575116 PFKMP08237 780 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 TRIM49P0CI25 452 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 TRIM49CP0CI26 452 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 CXCL8P10145 99 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 DLATP10515 647 aaKnown RBP12.89□□□□□ -0.35
PRPF8-212ENST00000575116 ITGA4P13612 1032 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 RAG1P15918 1043 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 PPP3CAQ08209 521 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 DUOXA2Q1HG44 320 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 MFSD5Q6N075 450 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 GBP6Q6ZN66 633 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 C15orf39Q6ZRI6 1047 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 RTN4RL1Q86UN2 441 aaPredicted RBP12.89□□□□□ -0.35
PRPF8-212ENST00000575116 RPUSD2Q8IZ73 545 aaKnown RBP12.89□□□□□ -0.35
PRPF8-212ENST00000575116 TMEM199Q8N511 208 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 ZNF516Q92618 1163 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 FAM212AQ96EL1 285 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 SCLYQ96I15 445 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 PDLIM2Q96JY6 352 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 SNX27Q96L92 541 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 NXF3Q9H4D5 531 aaKnown RBP12.89□□□□□ -0.35
PRPF8-212ENST00000575116 ELAC1Q9H777 363 aaKnown RBP12.89□□□□□ -0.35
PRPF8-212ENST00000575116 CNTN3Q9P232 1028 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 PRKAG2Q9UGJ0 569 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 GIT1Q9Y2X7 761 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 COQ4Q9Y3A0 265 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 C2CD2Q9Y426 696 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 DAAM1Q9Y4D1 1078 aa12.89□□□□□ -0.35
PRPF8-212ENST00000575116 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.89□□□□□ -0.353e-9■■□□□ 13.3
PRPF8-212ENST00000575116 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.89□□□□□ -0.35
PRPF8-212ENST00000575116 ENPP3O14638 875 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 RECQL4O94761 1208 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 KCNE1P15382 129 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 GCLMP48507 274 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 MXI1P50539 228 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 WNT7BP56706 349 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 MYL7Q01449 175 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 EXOC3L4Q17RC7 722 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 ZACNQ401N2 412 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 CBWD6Q4V339 395 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 CBWD3Q5JTY5 395 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 CBWD5Q5RIA9 395 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 SPECC1LQ69YQ0 1117 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 CNKSR3Q6P9H4 555 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 SV2AQ7L0J3 742 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 ZNF598Q86UK7 904 aaKnown RBP12.88□□□□□ -0.35
PRPF8-212ENST00000575116 ECHDC2Q86YB7 292 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 EHBP1Q8NDI1 1231 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 ANKRD36BP1Q96IX9 119 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 POP1Q99575 1024 aaKnown RBP12.88□□□□□ -0.35
PRPF8-212ENST00000575116 NUP58Q9BVL2 599 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 TMEM117Q9H0C3 514 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 PLCB1Q9NQ66 1216 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 PRDM5Q9NQX1 630 aaPredicted RBP12.88□□□□□ -0.35
PRPF8-212ENST00000575116 IMPACTQ9P2X3 320 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 PARP2Q9UGN5 583 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 SIK3Q9Y2K2 1263 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 HES2Q9Y543 173 aa12.88□□□□□ -0.35
PRPF8-212ENST00000575116 MEFVO15553 781 aaPredicted RBP12.87□□□□□ -0.35
PRPF8-212ENST00000575116 XPOTO43592 962 aaKnown RBP12.87□□□□□ -0.35
PRPF8-212ENST00000575116 TNNC2P02585 160 aa12.87□□□□□ -0.35
PRPF8-212ENST00000575116 TMEM191BP0C7N4 346 aa12.87□□□□□ -0.35
PRPF8-212ENST00000575116 AKAP5P24588 427 aa12.87□□□□□ -0.35
PRPF8-212ENST00000575116 CCDC173Q0VFZ6 552 aa12.87□□□□□ -0.35
PRPF8-212ENST00000575116 KCNMA1Q12791 1236 aa12.87□□□□□ -0.35
PRPF8-212ENST00000575116 TRIM14Q14142 442 aa12.87□□□□□ -0.35
PRPF8-212ENST00000575116 IKBKEQ14164 716 aa12.87□□□□□ -0.35
PRPF8-212ENST00000575116 TMEM132DQ14C87 1099 aa12.87□□□□□ -0.35
PRPF8-212ENST00000575116 SYCP1Q15431 976 aa12.87□□□□□ -0.35
PRPF8-212ENST00000575116 ZBTB6Q15916 424 aa12.87□□□□□ -0.35
PRPF8-212ENST00000575116 FIGNQ5HY92 759 aa12.87□□□□□ -0.35
PRPF8-212ENST00000575116 JADE1Q6IE81 842 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms