RNA–Protein interactions for RNA: ENST00000575009.5

SRRM2-222, Transcript of serine/arginine repetitive matrix 2, human

TSL 5

Gene SRRM2, Length 1,146 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-222	ENST00000575009	HERC2P3	Q9BVR0	1158 aa		28.63	■■■□□ 2.17
SRRM2-222	ENST00000575009	GPR62	Q9BZJ7	368 aa		28.63	■■■□□ 2.17
SRRM2-222	ENST00000575009	IKZF4	Q9H2S9	585 aa		28.63	■■■□□ 2.17
SRRM2-222	ENST00000575009	CD207	Q9UJ71	328 aa		28.63	■■■□□ 2.17
SRRM2-222	ENST00000575009	CUL9	Q8IWT3	2517 aa		28.63	■■■□□ 2.17
SRRM2-222	ENST00000575009	TTC28	Q96AY4	2481 aa		28.62	■■■□□ 2.17
SRRM2-222	ENST00000575009	C2CD2L	O14523	706 aa		28.62	■■■□□ 2.17
SRRM2-222	ENST00000575009	CLDN3	O15551	220 aa		28.62	■■■□□ 2.17
SRRM2-222	ENST00000575009	SOD2	P04179	222 aa		28.62	■■■□□ 2.17
SRRM2-222	ENST00000575009	IGFBP6	P24592	240 aa	Predicted RBP	28.62	■■■□□ 2.17
SRRM2-222	ENST00000575009	MCL1	Q07820	350 aa		28.62	■■■□□ 2.17
SRRM2-222	ENST00000575009	RNF168	Q8IYW5	571 aa	Predicted RBP	28.62	■■■□□ 2.17
SRRM2-222	ENST00000575009	SNX27	Q96L92	541 aa		28.62	■■■□□ 2.17
SRRM2-222	ENST00000575009	ZMAT2	Q96NC0	199 aa	Known RBP	28.62	■■■□□ 2.17
SRRM2-222	ENST00000575009	ACAP3	Q96P50	834 aa		28.62	■■■□□ 2.17
SRRM2-222	ENST00000575009	GOLGA2P5	Q9HBQ8	144 aa		28.62	■■■□□ 2.17
SRRM2-222	ENST00000575009	ADAM28	Q9UKQ2	775 aa		28.62	■■■□□ 2.17
SRRM2-222	ENST00000575009	IRAK3	Q9Y616	596 aa		28.62	■■■□□ 2.17
SRRM2-222	ENST00000575009	SMIM28	A0A1B0GU29	152 aa		28.61	■■■□□ 2.17
SRRM2-222	ENST00000575009	TISP43	B9A030	160 aa		28.61	■■■□□ 2.17
SRRM2-222	ENST00000575009	KIF4A	O95239	1232 aa		28.61	■■■□□ 2.17
SRRM2-222	ENST00000575009	PIGR	P01833	764 aa		28.61	■■■□□ 2.17
SRRM2-222	ENST00000575009	SOX4	Q06945	474 aa	Predicted RBP	28.61	■■■□□ 2.17
SRRM2-222	ENST00000575009	BMS1	Q14692	1282 aa	Known RBP	28.61	■■■□□ 2.17
SRRM2-222	ENST00000575009	RESP18	Q5W5W9	173 aa		28.61	■■■□□ 2.17
SRRM2-222	ENST00000575009	FUT10	Q6P4F1	479 aa		28.61	■■■□□ 2.17
SRRM2-222	ENST00000575009	ALKAL1	Q6UXT8	129 aa		28.61	■■■□□ 2.17
SRRM2-222	ENST00000575009	MAP4K3	Q8IVH8	894 aa		28.61	■■■□□ 2.17
SRRM2-222	ENST00000575009	LEO1	Q8WVC0	666 aa	Predicted RBP	28.61	■■■□□ 2.17
SRRM2-222	ENST00000575009	FGFBP2	Q9BYJ0	223 aa		28.61	■■■□□ 2.17
SRRM2-222	ENST00000575009	TOPORS	Q9NS56	1045 aa	Predicted RBP	28.61	■■■□□ 2.17
SRRM2-222	ENST00000575009	HCFC2	Q9Y5Z7	792 aa		28.61	■■■□□ 2.17
SRRM2-222	ENST00000575009	ANKRD63	C9JTQ0	380 aa		28.6	■■■□□ 2.17
SRRM2-222	ENST00000575009	MBTPS2	O43462	519 aa		28.6	■■■□□ 2.17
SRRM2-222	ENST00000575009	GAP43	P17677	238 aa		28.6	■■■□□ 2.17
SRRM2-222	ENST00000575009	TNFSF9	P41273	254 aa		28.6	■■■□□ 2.17
SRRM2-222	ENST00000575009	XKR4	Q5GH76	650 aa		28.6	■■■□□ 2.17
SRRM2-222	ENST00000575009	ZBTB41	Q5SVQ8	909 aa		28.6	■■■□□ 2.17
SRRM2-222	ENST00000575009	ZNF720	Q7Z2F6	126 aa		28.6	■■■□□ 2.17
SRRM2-222	ENST00000575009	APOL5	Q9BWW9	433 aa		28.6	■■■□□ 2.17
SRRM2-222	ENST00000575009	ST6GALNAC4	Q9H4F1	302 aa		28.6	■■■□□ 2.17
SRRM2-222	ENST00000575009	MRPL44	Q9H9J2	332 aa	Known RBP	28.6	■■■□□ 2.17
SRRM2-222	ENST00000575009	FRMD3	A2A2Y4	597 aa		28.59	■■■□□ 2.17
SRRM2-222	ENST00000575009	POLR2D	O15514	142 aa	Known RBP	28.59	■■■□□ 2.17
SRRM2-222	ENST00000575009	LILRB3	O75022	631 aa		28.59	■■■□□ 2.17
SRRM2-222	ENST00000575009	UROD	P06132	367 aa		28.59	■■■□□ 2.17
SRRM2-222	ENST00000575009	CASP5	P51878	434 aa		28.59	■■■□□ 2.17
SRRM2-222	ENST00000575009	KRT85	P78386	507 aa		28.59	■■■□□ 2.17
SRRM2-222	ENST00000575009	SLC10A6	Q3KNW5	377 aa		28.59	■■■□□ 2.17
SRRM2-222	ENST00000575009	TMEM130	Q8N3G9	435 aa		28.59	■■■□□ 2.17
SRRM2-222	ENST00000575009	TNMD	Q9H2S6	317 aa		28.59	■■■□□ 2.17
SRRM2-222	ENST00000575009	PANK4	Q9NVE7	773 aa		28.59	■■■□□ 2.17
SRRM2-222	ENST00000575009	KBTBD4	Q9NVX7	518 aa		28.59	■■■□□ 2.17
SRRM2-222	ENST00000575009	SEL1L	Q9UBV2	794 aa		28.59	■■■□□ 2.17
SRRM2-222	ENST00000575009	PLXNA3	P51805	1871 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	TADA2A	O75478	443 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	PPP1R37	O75864	691 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	CNP	P09543	421 aa	Known RBP	28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	CXCL8	P10145	99 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	MYB	P10242	640 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	SCP2	P22307	547 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	GLUD2	P49448	558 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	KCNA1	Q09470	495 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	SMAD4	Q13485	552 aa	Known RBP	28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	PUS10	Q3MIT2	529 aa	Known RBP	28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	HERC4	Q5GLZ8	1057 aa	Predicted RBP	28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	TMEM184A	Q6ZMB5	413 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	IQUB	Q8NA54	791 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	TMEM87A	Q8NBN3	555 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	SPATA32	Q96LK8	384 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	KLHL5	Q96PQ7	755 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	STRA6	Q9BX79	667 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	CUEDC2	Q9H467	287 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	MRPL17	Q9NRX2	175 aa	Known RBP	28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	FAM13B	Q9NYF5	915 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	VWA8	A3KMH1	1905 aa		28.58	■■■□□ 2.17
SRRM2-222	ENST00000575009	FAM189A1	O60320	539 aa		28.57	■■■□□ 2.16
SRRM2-222	ENST00000575009	EPCAM	P16422	314 aa		28.57	■■■□□ 2.16
SRRM2-222	ENST00000575009	CASP1	P29466	404 aa		28.57	■■■□□ 2.16
SRRM2-222	ENST00000575009	CLCNKB	P51801	687 aa		28.57	■■■□□ 2.16
SRRM2-222	ENST00000575009	COASY	Q13057	564 aa		28.57	■■■□□ 2.16
SRRM2-222	ENST00000575009	KIAA0319	Q5VV43	1072 aa		28.57	■■■□□ 2.16
SRRM2-222	ENST00000575009	ANKRD54	Q6NXT1	300 aa		28.57	■■■□□ 2.16
SRRM2-222	ENST00000575009	SMRP1	Q8NCR6	262 aa		28.57	■■■□□ 2.16
SRRM2-222	ENST00000575009	HPS3	Q969F9	1004 aa		28.57	■■■□□ 2.16
SRRM2-222	ENST00000575009	C18orf25	Q96B23	403 aa	Predicted RBP	28.57	■■■□□ 2.16
SRRM2-222	ENST00000575009	TRIM9	Q9C026	710 aa		28.57	■■■□□ 2.16
SRRM2-222	ENST00000575009	CNTN3	Q9P232	1028 aa		28.57	■■■□□ 2.16
SRRM2-222	ENST00000575009	STK39	Q9UEW8	545 aa		28.57	■■■□□ 2.16
SRRM2-222	ENST00000575009	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	28.56	■■■□□ 2.16
SRRM2-222	ENST00000575009	FSD2	A1L4K1	749 aa		28.56	■■■□□ 2.16
SRRM2-222	ENST00000575009	GCNT3	O95395	438 aa		28.56	■■■□□ 2.16
SRRM2-222	ENST00000575009	KCNE1	P15382	129 aa		28.56	■■■□□ 2.16
SRRM2-222	ENST00000575009	DSG1	Q02413	1049 aa		28.56	■■■□□ 2.16
SRRM2-222	ENST00000575009	SPAG1	Q07617	926 aa		28.56	■■■□□ 2.16
SRRM2-222	ENST00000575009	TPRN	Q4KMQ1	711 aa		28.56	■■■□□ 2.16
SRRM2-222	ENST00000575009	SYCE2	Q6PIF2	218 aa		28.56	■■■□□ 2.16
SRRM2-222	ENST00000575009	SLC22A17	Q8WUG5	538 aa		28.56	■■■□□ 2.16
SRRM2-222	ENST00000575009	MSTO1	Q9BUK6	570 aa		28.56	■■■□□ 2.16
SRRM2-222	ENST00000575009	CD320	Q9NPF0	282 aa		28.56	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms