RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 REXO2Q9Y3B8 237 aaKnown RBP6.39□□□□□ -1.39
CDC27-216ENST00000574304 SPEF1Q9Y4P9 236 aa6.39□□□□□ -1.39
CDC27-216ENST00000574304 hCG_2014768A0A024R1R8 64 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 RPS6KA4O75676 772 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 ATP5JP18859 108 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 FPR1P21462 350 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 CCND1P24385 295 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 PCSK1P29120 753 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 ACVRL1P37023 503 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 ALDH1A3P47895 512 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 RAP2BP61225 183 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 ABHD18Q0P651 414 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 ATXN7L2Q5T6C5 722 aaPredicted RBP6.38□□□□□ -1.39
CDC27-216ENST00000574304 EFCAB2Q5VUJ9 269 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 RHOT1Q8IXI2 618 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 DCLRE1CQ96SD1 692 aaKnown RBP6.38□□□□□ -1.39
CDC27-216ENST00000574304 MRI1Q9BV20 369 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 KRTAP4-2Q9BYR5 136 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 MMRN2Q9H8L6 949 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 TRPM5Q9NZQ8 1165 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 ACTL7AQ9Y615 435 aa6.38□□□□□ -1.39
CDC27-216ENST00000574304 PNPLA7Q6ZV29 1317 aa6.37□□□□□ -1.39
CDC27-216ENST00000574304 AHRRA9YTQ3 701 aa6.37□□□□□ -1.39
CDC27-216ENST00000574304 TEX33O43247 280 aa6.37□□□□□ -1.39
CDC27-216ENST00000574304 AKAP8O43823 692 aaKnown RBP6.37□□□□□ -1.39
CDC27-216ENST00000574304 GPR32O75388 356 aa6.37□□□□□ -1.39
CDC27-216ENST00000574304 AMY1AP04745 511 aa6.37□□□□□ -1.39
CDC27-216ENST00000574304 MCM7P33993 719 aa6.37□□□□□ -1.39
CDC27-216ENST00000574304 ANAPC15P60006 121 aa6.37□□□□□ -1.39
CDC27-216ENST00000574304 RNASE9P60153 205 aaKnown RBP6.37□□□□□ -1.39
CDC27-216ENST00000574304 KIF23Q02241 960 aaPredicted RBP6.37□□□□□ -1.39
CDC27-216ENST00000574304 OTUD7BQ6GQQ9 843 aa6.37□□□□□ -1.39
CDC27-216ENST00000574304 MIGA2Q7L4E1 593 aa6.37□□□□□ -1.39
CDC27-216ENST00000574304 ZGPATQ8N5A5 531 aaKnown RBP6.37□□□□□ -1.39
CDC27-216ENST00000574304 ZNF768Q9H5H4 540 aaKnown RBP6.37□□□□□ -1.39
CDC27-216ENST00000574304 NRDE2Q9H7Z3 1164 aa6.37□□□□□ -1.39
CDC27-216ENST00000574304 GPRC5BQ9NZH0 403 aa6.37□□□□□ -1.39
CDC27-216ENST00000574304 SRRDQ9UH36 339 aa6.37□□□□□ -1.39
CDC27-216ENST00000574304 SHROOM4Q9ULL8 1493 aa6.36□□□□□ -1.39
CDC27-216ENST00000574304 MYBBP1AQ9BQG0 1328 aaKnown RBP6.36□□□□□ -1.39
CDC27-216ENST00000574304 MAKP20794 623 aa6.36□□□□□ -1.39
CDC27-216ENST00000574304 NR4A1P22736 598 aa6.36□□□□□ -1.39
CDC27-216ENST00000574304 MTM1Q13496 603 aa6.36□□□□□ -1.39
CDC27-216ENST00000574304 ODF1Q14990 250 aa6.36□□□□□ -1.39
CDC27-216ENST00000574304 GDF7Q7Z4P5 450 aa6.36□□□□□ -1.39
CDC27-216ENST00000574304 DRC7Q8IY82 874 aa6.36□□□□□ -1.39
CDC27-216ENST00000574304 HDAC10Q969S8 669 aa6.36□□□□□ -1.39
CDC27-216ENST00000574304 CLIP3Q96DZ5 547 aa6.36□□□□□ -1.39
CDC27-216ENST00000574304 PHACTR3Q96KR7 559 aa6.36□□□□□ -1.39
CDC27-216ENST00000574304 SLC46A2Q9BY10 475 aa6.36□□□□□ -1.39
CDC27-216ENST00000574304 RUVBL1Q9Y265 456 aaKnown RBP6.36□□□□□ -1.39
CDC27-216ENST00000574304 CHST2Q9Y4C5 530 aa6.36□□□□□ -1.39
CDC27-216ENST00000574304 DRGXA6NNA5 263 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 DIRC3C9JPN6 131 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 CYR61O00622 381 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 HTRA2O43464 458 aaPredicted RBP6.35□□□□□ -1.39
CDC27-216ENST00000574304 ZSCAN20P17040 1043 aaPredicted RBP6.35□□□□□ -1.39
CDC27-216ENST00000574304 DDCP20711 480 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 PTGS2P35354 604 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 CHN2P52757 468 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 ATP8B2P98198 1209 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 EXOSC10Q01780 885 aaKnown RBP6.35□□□□□ -1.39
CDC27-216ENST00000574304 ZNF529Q6P280 563 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 SEM1Q6ZVN7 128 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 SYNE4Q8N205 404 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 HAS1Q92839 578 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 COA7Q96BR5 231 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 MYOCQ99972 504 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 TDP1Q9NUW8 608 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 SLC23A1Q9UHI7 598 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 LIMCH1Q9UPQ0 1083 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 IPPQ9Y573 584 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 PCDHA13Q9Y5I0 950 aa6.35□□□□□ -1.39
CDC27-216ENST00000574304 CCDC154A6NI56 674 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 SNUPNO95149 360 aaKnown RBP6.34□□□□□ -1.39
CDC27-216ENST00000574304 POMCP01189 267 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 ADH4P08319 380 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 NCLP19338 710 aaKnown RBP6.34□□□□□ -1.39
CDC27-216ENST00000574304 EDNRBP24530 442 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 RECQLP46063 649 aaPredicted RBP6.34□□□□□ -1.39
CDC27-216ENST00000574304 ADKP55263 362 aaKnown RBP6.34□□□□□ -1.39
CDC27-216ENST00000574304 IGBP1P78318 339 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 FAM189BP81408 668 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 KLF10Q13118 480 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 C3orf36Q3SXR2 165 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 FAM102AQ5T9C2 384 aaPredicted RBP6.34□□□□□ -1.39
CDC27-216ENST00000574304 MED25Q71SY5 747 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 PLXDC1Q8IUK5 500 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 ZFPM1Q8IX07 1006 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 RAB24Q969Q5 203 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 LENG9Q96B70 501 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 NEU1Q99519 415 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 TEX101Q9BY14 249 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 FZD1Q9UP38 647 aa6.34□□□□□ -1.39
CDC27-216ENST00000574304 USP15Q9Y4E8 981 aaPredicted RBP6.34□□□□□ -1.39
CDC27-216ENST00000574304 RNASET2O00584 256 aaKnown RBP6.33□□□□□ -1.4
CDC27-216ENST00000574304 ZNF185O15231 689 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 NCR1O76036 304 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 SPATA31D3P0C874 917 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 ZFP36P26651 326 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms