RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP30.35■■■□□ 2.45
SCARF1-207ENST00000573867 TISP43B9A030 160 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 HNRNPDLO14979 420 aaKnown RBP30.35■■■□□ 2.45
SCARF1-207ENST00000573867 CLDN3O15551 220 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 FAM189A1O60320 539 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 IDEP14735 1019 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 GAP43P17677 238 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 SCP2P22307 547 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 NDUFV1P49821 464 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 LIG4P49917 911 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 CASP5P51878 434 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 ZBTB41Q5SVQ8 909 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 IQUBQ8NA54 791 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 SPATA32Q96LK8 384 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 ACAP3Q96P50 834 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 HERC2P3Q9BVR0 1158 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 COLEC11Q9BWP8 271 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 GPR62Q9BZJ7 368 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 CUEDC2Q9H467 287 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 SEL1LQ9UBV2 794 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 IRAK3Q9Y616 596 aa30.35■■■□□ 2.45
SCARF1-207ENST00000573867 SMIM28A0A1B0GU29 152 aa30.34■■■□□ 2.45
SCARF1-207ENST00000573867 ANKRD63C9JTQ0 380 aa30.34■■■□□ 2.45
SCARF1-207ENST00000573867 LILRB3O75022 631 aa30.34■■■□□ 2.45
SCARF1-207ENST00000573867 SOD2P04179 222 aa30.34■■■□□ 2.45
SCARF1-207ENST00000573867 IL9P15248 144 aa30.34■■■□□ 2.45
SCARF1-207ENST00000573867 CA8P35219 290 aa30.34■■■□□ 2.45
SCARF1-207ENST00000573867 SOX4Q06945 474 aaPredicted RBP30.34■■■□□ 2.45
SCARF1-207ENST00000573867 KCNA1Q09470 495 aa30.34■■■□□ 2.45
SCARF1-207ENST00000573867 HSP90AA2PQ14568 343 aaPredicted RBP30.34■■■□□ 2.45
SCARF1-207ENST00000573867 TRIM9Q9C026 710 aa30.34■■■□□ 2.45
SCARF1-207ENST00000573867 GOLGA2P5Q9HBQ8 144 aa30.34■■■□□ 2.45
SCARF1-207ENST00000573867 PANK4Q9NVE7 773 aa30.34■■■□□ 2.45
SCARF1-207ENST00000573867 CLASP2O75122 1294 aaKnown RBP30.33■■■□□ 2.45
SCARF1-207ENST00000573867 NR1I2O75469 434 aa30.33■■■□□ 2.45
SCARF1-207ENST00000573867 KIF4AO95239 1232 aa30.33■■■□□ 2.45
SCARF1-207ENST00000573867 TNFSF9P41273 254 aa30.33■■■□□ 2.45
SCARF1-207ENST00000573867 YARSP54577 528 aaKnown RBP30.33■■■□□ 2.45
SCARF1-207ENST00000573867 SLC10A6Q3KNW5 377 aa30.33■■■□□ 2.45
SCARF1-207ENST00000573867 HERC4Q5GLZ8 1057 aaPredicted RBP30.33■■■□□ 2.45
SCARF1-207ENST00000573867 PTCRAQ6ISU1 281 aaPredicted RBP30.33■■■□□ 2.45
SCARF1-207ENST00000573867 FUT10Q6P4F1 479 aa30.33■■■□□ 2.45
SCARF1-207ENST00000573867 HASPINQ8TF76 798 aa30.33■■■□□ 2.45
SCARF1-207ENST00000573867 B3GALT6Q96L58 329 aa30.33■■■□□ 2.45
SCARF1-207ENST00000573867 MRPL44Q9H9J2 332 aaKnown RBP30.33■■■□□ 2.45
SCARF1-207ENST00000573867 OLFML3Q9NRN5 406 aa30.33■■■□□ 2.45
SCARF1-207ENST00000573867 TOPORSQ9NS56 1045 aaPredicted RBP30.33■■■□□ 2.45
SCARF1-207ENST00000573867 FAM13BQ9NYF5 915 aa30.33■■■□□ 2.45
SCARF1-207ENST00000573867 CNTN3Q9P232 1028 aa30.33■■■□□ 2.45
SCARF1-207ENST00000573867 ADAM28Q9UKQ2 775 aa30.33■■■□□ 2.45
SCARF1-207ENST00000573867 TRIP11Q15643 1979 aa30.32■■■□□ 2.44
SCARF1-207ENST00000573867 GRXCR2A6NFK2 248 aa30.32■■■□□ 2.44
SCARF1-207ENST00000573867 MYBP10242 640 aa30.32■■■□□ 2.44
SCARF1-207ENST00000573867 CASP1P29466 404 aa30.32■■■□□ 2.44
SCARF1-207ENST00000573867 MATR3P43243 847 aaKnown RBP eCLIP30.32■■■□□ 2.44
SCARF1-207ENST00000573867 LLGL2Q6P1M3 1020 aa30.32■■■□□ 2.44
SCARF1-207ENST00000573867 HPS3Q969F9 1004 aa30.32■■■□□ 2.44
SCARF1-207ENST00000573867 C5orf42Q9H799 3197 aa30.31■■■□□ 2.44
SCARF1-207ENST00000573867 TTC28Q96AY4 2481 aa30.31■■■□□ 2.44
SCARF1-207ENST00000573867 A0A0B4J269 797 aa30.31■■■□□ 2.44
SCARF1-207ENST00000573867 CXCL8P10145 99 aa30.31■■■□□ 2.44
SCARF1-207ENST00000573867 KCNE1P15382 129 aa30.31■■■□□ 2.44
SCARF1-207ENST00000573867 COASYQ13057 564 aa30.31■■■□□ 2.44
SCARF1-207ENST00000573867 TMEM184AQ6ZMB5 413 aa30.31■■■□□ 2.44
SCARF1-207ENST00000573867 TMEM130Q8N3G9 435 aa30.31■■■□□ 2.44
SCARF1-207ENST00000573867 GLIS3Q8NEA6 775 aa30.31■■■□□ 2.44
SCARF1-207ENST00000573867 KCNH3Q9ULD8 1083 aa30.31■■■□□ 2.44
SCARF1-207ENST00000573867 HCFC2Q9Y5Z7 792 aa30.31■■■□□ 2.44
SCARF1-207ENST00000573867 KIAA0319Q5VV43 1072 aa30.3■■■□□ 2.44
SCARF1-207ENST00000573867 ADALQ6DHV7 355 aa30.3■■■□□ 2.44
SCARF1-207ENST00000573867 CNNM4Q6P4Q7 775 aa30.3■■■□□ 2.44
SCARF1-207ENST00000573867 CD300LGQ6UXG3 332 aa30.3■■■□□ 2.44
SCARF1-207ENST00000573867 C18orf25Q96B23 403 aaPredicted RBP30.3■■■□□ 2.44
SCARF1-207ENST00000573867 HVCN1Q96D96 273 aa30.3■■■□□ 2.44
SCARF1-207ENST00000573867 UHRF1Q96T88 793 aaPredicted RBP30.3■■■□□ 2.44
SCARF1-207ENST00000573867 GDPD2Q9HCC8 539 aa30.3■■■□□ 2.44
SCARF1-207ENST00000573867 CHST7Q9NS84 486 aa30.3■■■□□ 2.44
SCARF1-207ENST00000573867 STK39Q9UEW8 545 aa30.3■■■□□ 2.44
SCARF1-207ENST00000573867 CD207Q9UJ71 328 aa30.3■■■□□ 2.44
SCARF1-207ENST00000573867 A0A1B0GVL5 298 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 C2CD2LO14523 706 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 OGTO15294 1046 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 MBTPS2O43462 519 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 GCNT3O95395 438 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 CNPP09543 421 aaKnown RBP30.29■■■□□ 2.44
SCARF1-207ENST00000573867 PFKFB1P16118 471 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 ABCD1P33897 745 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 CLCNKBP51801 687 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 GRAMD1CQ8IYS0 662 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 C3orf58Q8NDZ4 430 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 C7orf25Q9BPX7 421 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 SERTAD1Q9UHV2 236 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 HPSEQ9Y251 543 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 ATP6V1DQ9Y5K8 247 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 STYXL1Q9Y6J8 313 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 CUL9Q8IWT3 2517 aa30.29■■■□□ 2.44
SCARF1-207ENST00000573867 ACTN4O43707 911 aaKnown RBP30.28■■■□□ 2.44
SCARF1-207ENST00000573867 TADA2AO75478 443 aa30.28■■■□□ 2.44
SCARF1-207ENST00000573867 URODP06132 367 aa30.28■■■□□ 2.44
SCARF1-207ENST00000573867 CLTAP09496 248 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms