RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 ARAP3Q8WWN8 1544 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 DHX29Q7Z478 1369 aaKnown RBP6.24□□□□□ -1.41
CDC27-215ENST00000573550 AKR1B10O60218 316 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 MFAP3LO75121 409 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 RBP3P10745 1247 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 ADSLP30566 484 aaPredicted RBP6.24□□□□□ -1.41
CDC27-215ENST00000573550 MAN2A2P49641 1150 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 APBA1Q02410 837 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 CRHR2Q13324 411 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 NRN1LQ496H8 165 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 DCAF17Q5H9S7 520 aaPredicted RBP6.24□□□□□ -1.41
CDC27-215ENST00000573550 PRAMEF14Q5SWL7 426 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 DOK3Q7L591 496 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 TMPRSS6Q8IU80 811 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 C1orf210Q8IVY1 113 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 MDM1Q8TC05 714 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 ATXN2LQ8WWM7 1075 aaKnown RBP6.24□□□□□ -1.41
CDC27-215ENST00000573550 SSH1Q8WYL5 1049 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 SLC2A13Q96QE2 648 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 CDC5LQ99459 802 aaKnown RBP6.24□□□□□ -1.41
CDC27-215ENST00000573550 GPR87Q9BY21 358 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 EPC1Q9H2F5 836 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 PRKRIP1Q9H875 184 aaPredicted RBP6.24□□□□□ -1.41
CDC27-215ENST00000573550 AURKAIP1Q9NWT8 199 aaPredicted RBP6.24□□□□□ -1.41
CDC27-215ENST00000573550 PCDHGA2Q9Y5H1 932 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 FAM135AQ9P2D6 1515 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 SMG6Q86US8 1419 aaKnown RBP6.24□□□□□ -1.41
CDC27-215ENST00000573550 WASHC2CQ9Y4E1 1318 aa6.24□□□□□ -1.41
CDC27-215ENST00000573550 NEURL4Q96JN8 1562 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 ATP10BO94823 1461 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 USP47Q96K76 1375 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 PCDHGA12O60330 932 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 MIIPQ5JXC2 388 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 METTL24Q5JXM2 366 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 GJC2Q5T442 439 aaPredicted RBP6.23□□□□□ -1.41
CDC27-215ENST00000573550 NAIF1Q69YI7 327 aaPredicted RBP6.23□□□□□ -1.41
CDC27-215ENST00000573550 PGM2L1Q6PCE3 622 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 GPRIN1Q7Z2K8 1008 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 GSPT2Q8IYD1 628 aaKnown RBP6.23□□□□□ -1.41
CDC27-215ENST00000573550 TRMT2AQ8IZ69 625 aaKnown RBP6.23□□□□□ -1.41
CDC27-215ENST00000573550 RPUSD2Q8IZ73 545 aaKnown RBP6.23□□□□□ -1.41
CDC27-215ENST00000573550 OR7D4Q8NG98 312 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 OR52N2Q8NGI0 321 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 JADE3Q92613 823 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 ZNF503Q96F45 646 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 CEP95Q96GE4 821 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 FAXDC2Q96IV6 333 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 MNTQ99583 582 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 ZNF747Q9BV97 191 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 ASPSCR1Q9BZE9 553 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 ZNF703Q9H7S9 590 aaPredicted RBP6.23□□□□□ -1.41
CDC27-215ENST00000573550 BCO1Q9HAY6 547 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 CEP72Q9P209 647 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 CFDP1Q9UEE9 299 aaPredicted RBP6.23□□□□□ -1.41
CDC27-215ENST00000573550 PCDHGA9Q9Y5G4 932 aaKnown RBP6.23□□□□□ -1.41
CDC27-215ENST00000573550 PCDHGA8Q9Y5G5 932 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 PCDHGA7Q9Y5G6 932 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 PCDHGA6Q9Y5G7 932 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 PCDHGA3Q9Y5H0 932 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 KIF7Q2M1P5 1343 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 FANCIQ9NVI1 1328 aa6.23□□□□□ -1.41
CDC27-215ENST00000573550 GPRASP1Q5JY77 1395 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 WNT10BO00744 389 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 C1SP09871 688 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 MYBL2P10244 700 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 HK1P19367 917 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 ECHS1P30084 290 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 SREBF1P36956 1147 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 KRT85P78386 507 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 MGAT2Q10469 447 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 CSRP2Q16527 193 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 CRIP3Q6Q6R5 217 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 FAM83AQ86UY5 434 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 XYLT1Q86Y38 959 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 REPS2Q8NFH8 660 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 OR2I1PQ8NGU4 316 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 CACTINQ8WUQ7 758 aaKnown RBP6.22□□□□□ -1.41
CDC27-215ENST00000573550 PGBD4Q96DM1 585 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 CPPED1Q9BRF8 314 aaPredicted RBP6.22□□□□□ -1.41
CDC27-215ENST00000573550 ANP32EQ9BTT0 268 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 MKS1Q9NXB0 559 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 NOP58Q9Y2X3 529 aaKnown RBP6.22□□□□□ -1.41
CDC27-215ENST00000573550 XDHP47989 1333 aa6.22□□□□□ -1.41
CDC27-215ENST00000573550 PRDM15P57071 1507 aaPredicted RBP6.21□□□□□ -1.42
CDC27-215ENST00000573550 ABCC2Q92887 1545 aa6.21□□□□□ -1.42
CDC27-215ENST00000573550 SHTN1A0MZ66 631 aa6.21□□□□□ -1.42
CDC27-215ENST00000573550 GRXCR1A8MXD5 290 aa6.21□□□□□ -1.42
CDC27-215ENST00000573550 B5MCH6 92 aa6.21□□□□□ -1.42
CDC27-215ENST00000573550 AMHP03971 560 aa6.21□□□□□ -1.42
CDC27-215ENST00000573550 FLT3LGP49771 235 aa6.21□□□□□ -1.42
CDC27-215ENST00000573550 FOXE3Q13461 319 aa6.21□□□□□ -1.42
CDC27-215ENST00000573550 CNGB1Q14028 1251 aaPredicted RBP6.21□□□□□ -1.42
CDC27-215ENST00000573550 SEPT2Q15019 361 aa6.21□□□□□ -1.42
CDC27-215ENST00000573550 PCBP2Q15366 365 aaKnown RBP eCLIP6.21□□□□□ -1.423e-7■□□□□ 10.6
CDC27-215ENST00000573550 CLUL1Q15846 466 aa6.21□□□□□ -1.42
CDC27-215ENST00000573550 MFSD14BQ5SR56 506 aa6.21□□□□□ -1.42
CDC27-215ENST00000573550 ANKS6Q68DC2 871 aa6.21□□□□□ -1.42
CDC27-215ENST00000573550 ZNF572Q7Z3I7 529 aaPredicted RBP6.21□□□□□ -1.42
CDC27-215ENST00000573550 FUBP3Q96I24 572 aaKnown RBP eCLIP6.21□□□□□ -1.42
CDC27-215ENST00000573550 ADI1Q9BV57 179 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms