RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ZHX3Q9H4I2 956 aa13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 TOPORSQ9NS56 1045 aaPredicted RBP13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 CHST7Q9NS84 486 aa13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 MTMR6Q9Y217 621 aa13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 C2CD4DB7Z1M9 353 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 SLC26A4O43511 780 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 MCF2P10911 925 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 PLCG1P19174 1290 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 MARCKSP29966 332 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 CREMQ03060 361 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 MCM6Q14566 821 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 NAB2Q15742 525 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 ARSHQ5FYA8 562 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 SPECC1Q5M775 1068 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 RTP2Q5QGT7 225 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 PRSS55Q6UWB4 352 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 MPZL3Q6UWV2 235 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 TMEM161BQ8NDZ6 487 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 FEZF2Q8TBJ5 459 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 EDAQ92838 391 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 REEP2Q9BRK0 252 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 RXFP1Q9HBX9 757 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 PTPRHQ9HD43 1115 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 LARSQ9P2J5 1176 aaKnown RBP13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 DAXXQ9UER7 740 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 DPP7Q9UHL4 492 aa13.92□□□□□ -0.18
NPLOC4-213ENST00000573519 SMIM28A0A1B0GU29 152 aa13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 FAM13AO94988 1023 aa13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 MAPTP10636 758 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 CLCNKBP51801 687 aa13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 ZXDAP98168 799 aa13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 SEZ6Q53EL9 994 aa13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 FOXD4L5Q5VV16 416 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 GPR149Q86SP6 731 aa13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 MYCT1Q8N699 235 aa13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 TDRD5Q8NAT2 981 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 LRRC15Q8TF66 581 aa13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 FOXD4L4Q8WXT5 416 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 RAD54LQ92698 747 aa13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 ZBTB45Q96K62 511 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 ACAP3Q96P50 834 aa13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 PPP1R10Q96QC0 940 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 NTPCRQ9BSD7 190 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 TTPALQ9BTX7 342 aa13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 GOLGA2P5Q9HBQ8 144 aa13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 ODF2LQ9ULJ1 636 aa13.91□□□□□ -0.18
NPLOC4-213ENST00000573519 CCDC195A0A1B0GUA6 201 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 H0YCG3 227 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 K7ENM7 598 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 TGM5O43548 720 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 STX6O43752 255 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 TBCAO75347 108 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 TOM1L1O75674 476 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 B3GAT3O94766 335 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 PROZP22891 400 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 ELAVL2Q12926 359 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 NOLC1Q14978 699 aaKnown RBP eCLIP13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 PTPAQ15257 358 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 PSMD5Q16401 504 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 PTPN21Q16825 1174 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 CCDC149Q6ZUS6 474 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 HFE2Q6ZVN8 426 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 HAUS6Q7Z4H7 955 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 LARP4BQ92615 738 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 EPSTI1Q96J88 318 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 UROC1Q96N76 676 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 CLIC6Q96NY7 704 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 BLOC1S4Q9NUP1 217 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 SLC38A7Q9NVC3 462 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 FNIP2Q9P278 1114 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 CCDC39Q9UFE4 941 aa13.9□□□□□ -0.18
NPLOC4-213ENST00000573519 NCOR1O75376 2440 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 ABLIM1O14639 778 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 CLDN3O15551 220 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 RFPL2O75678 378 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 HSP90AA1P07900 732 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 TXLNAP40222 546 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 LIG4P49917 911 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 NCKAP1LP55160 1127 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 UPP1Q16831 310 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 DCLRE1AQ6PJP8 1040 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 C15orf39Q6ZRI6 1047 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 TRIM67Q6ZTA4 783 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 USP49Q70CQ1 688 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 KREMEN2Q8NCW0 462 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 ACSF2Q96CM8 615 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 SNX27Q96L92 541 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 CCSER1Q9C0I3 900 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 PIDD1Q9HB75 910 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 PARVGQ9HBI0 331 aa13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 FBXO2Q9UK22 296 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-213ENST00000573519 TMEM221A6NGB7 291 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 I3L4J1 428 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 M0R296 226 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 PODXLO00592 558 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 HNRNPDLO14979 420 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 TRAPPC3O43617 180 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 TRAK2O60296 914 aa13.88□□□□□ -0.19
NPLOC4-213ENST00000573519 BRD1O95696 1058 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms