RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 WEE2P0C1S8 567 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 EHHADHQ08426 723 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 SGO2Q562F6 1265 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 ZNF365Q70YC5 407 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 RPUSD2Q8IZ73 545 aaKnown RBP10.82□□□□□ -0.68
SMG6-213ENST00000573166 DNAJC19Q96DA6 116 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 TMEM169Q96HH4 297 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 POP1Q99575 1024 aaKnown RBP10.82□□□□□ -0.68
SMG6-213ENST00000573166 C11orf70Q9BRQ4 267 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 SNTG2Q9NY99 539 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 TTLL3Q9Y4R7 772 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 SARSP49591 514 aaKnown RBP10.82□□□□□ -0.68
SMG6-213ENST00000573166 RBM43Q6ZSC3 357 aaKnown RBP10.82□□□□□ -0.68
SMG6-213ENST00000573166 CD302Q8IX05 232 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 YME1L1Q96TA2 773 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 ADAM2Q99965 735 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 EDEM3Q9BZQ6 932 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 DPP3Q9NY33 737 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 TAF1LQ8IZX4 1826 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 AKAP11Q9UKA4 1901 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 ZNF862O60290 1169 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 ITGBL1O95965 494 aaPredicted RBP10.81□□□□□ -0.68
SMG6-213ENST00000573166 THP07101 528 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 AKAP5P24588 427 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 SOX5P35711 763 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 CAPSQ13938 189 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 GLYCTKQ8IVS8 523 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 NME8Q8N427 588 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 GLIS3Q8NEA6 775 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 HOXA2O43364 376 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 SSTR3P32745 418 aaPredicted RBP10.81□□□□□ -0.68
SMG6-213ENST00000573166 TAF6P49848 677 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 CASP5P51878 434 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 PMS1P54277 932 aaKnown RBP10.81□□□□□ -0.68
SMG6-213ENST00000573166 SV2CQ496J9 727 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 MAP4K3Q8IVH8 894 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 ZNF296Q8WUU4 475 aaPredicted RBP10.81□□□□□ -0.68
SMG6-213ENST00000573166 CELF4Q9BZC1 486 aaKnown RBP10.81□□□□□ -0.68
SMG6-213ENST00000573166 NIF3L1Q9GZT8 377 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 CCDC113Q9H0I3 377 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 NGRNQ9NPE2 291 aaKnown RBP10.81□□□□□ -0.68
SMG6-213ENST00000573166 LRP5O75197 1615 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 RPTORQ8N122 1335 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 A6NJR5 290 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 OPLAHO14841 1288 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 ZC3H11AO75152 810 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMG6-213ENST00000573166 RHOXF2BP0C7M4 288 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 MCF2P10911 925 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 ZNF18P17022 549 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 ETF1P62495 437 aaKnown RBP10.81□□□□□ -0.68
SMG6-213ENST00000573166 MRPS6P82932 125 aaKnown RBP10.81□□□□□ -0.68
SMG6-213ENST00000573166 CALCOCO2Q13137 446 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 TAX1BP1Q86VP1 789 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 KIAA0319LQ8IZA0 1049 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 CCDC26Q8TAB7 109 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 GCNAQ96QF7 691 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 RHOXF2Q9BQY4 288 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 GABRQQ9UN88 632 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 PCDHA13Q9Y5I0 950 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 FHOD1Q9Y613 1164 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 SAR1BQ9Y6B6 198 aa10.81□□□□□ -0.68
SMG6-213ENST00000573166 N4BP2Q86UW6 1770 aaPredicted RBP10.8□□□□□ -0.68
SMG6-213ENST00000573166 TISP43B9A030 160 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 P4HA2O15460 535 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 ARIH2O95376 493 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 ZNF792Q3KQV3 632 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 CFAP221Q4G0U5 840 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 HYIQ5T013 277 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 C10orf76Q5T2E6 689 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 NAA35Q5VZE5 725 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 MAP7D3Q8IWC1 876 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 LENG9Q96B70 501 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 STK33Q9BYT3 514 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 CNOT8Q9UFF9 292 aaKnown RBP10.8□□□□□ -0.68
SMG6-213ENST00000573166 NR2E3Q9Y5X4 410 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 CCDC85CA6NKD9 419 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 M0R2N6 131 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 GBP2P32456 591 aaPredicted RBP10.8□□□□□ -0.68
SMG6-213ENST00000573166 GTF2F1P35269 517 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMG6-213ENST00000573166 CYP24A1Q07973 514 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 MYBPC2Q14324 1141 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 NR1I3Q14994 352 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 LLGL1Q15334 1064 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 NECAB2Q7Z6G3 386 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 TMEM161BQ8NDZ6 487 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 NSMCE1Q8WV22 266 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMG6-213ENST00000573166 AGPAT5Q9NUQ2 364 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 TRAF3IP3Q9Y228 551 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 TREHO43280 583 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 POMCP01189 267 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 AXLP30530 894 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 PNPLA4P41247 253 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 CDO1Q16878 200 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 ERCC6LQ2NKX8 1250 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 NT5DC1Q5TFE4 455 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 PDXDC1Q6P996 788 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 KLHL7Q8IXQ5 586 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 RBBP8NLQ8NC74 664 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms