RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 CPLX4Q7Z7G2 160 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 SLC17A8Q8NDX2 589 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 KIFAP3Q92845 792 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 MFSD14AQ96MC6 490 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 FBXL18Q96ME1 805 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 STK32BQ9NY57 414 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 SEPT9Q9UHD8 586 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-212ENST00000573126 FZD1Q9UP38 647 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 ECEL1O95672 775 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 PAEPP09466 180 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 CHN1P15882 459 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 MAPK4P31152 587 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 SSTR3P32745 418 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-212ENST00000573126 CYP1B1Q16678 543 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 SPRED3Q2MJR0 410 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 SGO2Q562F6 1265 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 ACAD10Q6JQN1 1059 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 C6orf89Q6UWU4 347 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 YTHDF3Q7Z739 585 aaKnown RBP12.01□□□□□ -0.49
RPAIN-212ENST00000573126 GPD1LQ8N335 351 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 MORC4Q8TE76 937 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 PSPC1Q8WXF1 523 aaKnown RBP12.01□□□□□ -0.49
RPAIN-212ENST00000573126 CABS1Q96KC9 395 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 CCDC113Q9H0I3 377 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 PASKQ96RG2 1323 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 RGS20O76081 388 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 RRM1P23921 792 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 TRIP13Q15645 432 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-212ENST00000573126 CLEC16AQ2KHT3 1053 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 CCDC38Q502W7 563 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 SPOPLQ6IQ16 392 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 CYFIP1Q7L576 1253 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 OTUD6AQ7L8S5 288 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 TAS1R3Q7RTX0 852 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 VSIG10LQ86VR7 867 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 CCDC60Q8IWA6 550 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-212ENST00000573126 PGM2Q96G03 612 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 SEC16BQ96JE7 1060 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 XPO6Q96QU8 1125 aaKnown RBP12.01□□□□□ -0.49
RPAIN-212ENST00000573126 NTPCRQ9BSD7 190 aaKnown RBP12.01□□□□□ -0.49
RPAIN-212ENST00000573126 XPNPEP1Q9NQW7 623 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 CHST7Q9NS84 486 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 C1orf112Q9NSG2 853 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 DNAJC17Q9NVM6 304 aaKnown RBP12.01□□□□□ -0.49
RPAIN-212ENST00000573126 MAP3K20Q9NYL2 800 aaKnown RBP12.01□□□□□ -0.49
RPAIN-212ENST00000573126 PARP2Q9UGN5 583 aa12.01□□□□□ -0.49
RPAIN-212ENST00000573126 RIPK2O43353 540 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 SCP2P22307 547 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 FNTAP49354 379 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 WNT7BP56706 349 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 CALCOCO2Q13137 446 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 ERMARDQ5T6L9 678 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 SNRNP48Q6IEG0 339 aaKnown RBP12□□□□□ -0.49
RPAIN-212ENST00000573126 USP37Q86T82 979 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 SPIRE2Q8WWL2 714 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 ZNF516Q92618 1163 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 ATP6V0A1Q93050 837 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 HERPUD2Q9BSE4 406 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 DDX23Q9BUQ8 820 aaKnown RBP12□□□□□ -0.49
RPAIN-212ENST00000573126 ADAM7Q9H2U9 754 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 CNOT10Q9H9A5 744 aaKnown RBP12□□□□□ -0.49
RPAIN-212ENST00000573126 O00370 1275 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 ATP2C2O75185 946 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 FSBPO95073 299 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 ACSL3O95573 720 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 TNNI1P19237 187 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 CCND2P30279 289 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 ACOT2P49753 483 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 PRKCEQ02156 737 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 KRT17Q04695 432 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 CIAPIN1Q6FI81 312 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 KCNV1Q6PIU1 500 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 CCDC121Q6ZUS5 278 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 ART4Q93070 314 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 HVCN1Q96D96 273 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 FAM118BQ9BPY3 351 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 OSBPL7Q9BZF2 842 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 TAOK3Q9H2K8 898 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 ASIC3Q9UHC3 531 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 PSME4Q14997 1843 aa12□□□□□ -0.49
RPAIN-212ENST00000573126 TP73O15350 636 aa11.99□□□□□ -0.49
RPAIN-212ENST00000573126 STBD1O95210 358 aa11.99□□□□□ -0.49
RPAIN-212ENST00000573126 RARGP13631 454 aa11.99□□□□□ -0.49
RPAIN-212ENST00000573126 KCNA2P16389 499 aa11.99□□□□□ -0.49
RPAIN-212ENST00000573126 VPS41P49754 854 aa11.99□□□□□ -0.49
RPAIN-212ENST00000573126 CDR1P51861 262 aa11.99□□□□□ -0.49
RPAIN-212ENST00000573126 GCNT1Q02742 428 aa11.99□□□□□ -0.49
RPAIN-212ENST00000573126 MTERF2Q49AM1 385 aa11.99□□□□□ -0.49
RPAIN-212ENST00000573126 BRDTQ58F21 947 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-212ENST00000573126 GKAP1Q5VSY0 366 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-212ENST00000573126 PRAMEF18Q5VWM3 479 aa11.99□□□□□ -0.49
RPAIN-212ENST00000573126 PASD1Q8IV76 773 aa11.99□□□□□ -0.49
RPAIN-212ENST00000573126 CCDC13Q8IYE1 715 aa11.99□□□□□ -0.49
RPAIN-212ENST00000573126 MCOLN2Q8IZK6 566 aa11.99□□□□□ -0.49
RPAIN-212ENST00000573126 CACNA2D3Q8IZS8 1091 aa11.99□□□□□ -0.49
RPAIN-212ENST00000573126 ZKSCAN4Q969J2 545 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-212ENST00000573126 CHMP6Q96FZ7 201 aa11.99□□□□□ -0.49
RPAIN-212ENST00000573126 POLR3FQ9H1D9 316 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms