RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ANK1P16157 1881 aa17.28■□□□□ 0.36
CHD3-215ENST00000572750 PRR33A8MZF0 331 aa17.27■□□□□ 0.36
CHD3-215ENST00000572750 NT5C1B-RDH14C9J2C7 533 aa17.27■□□□□ 0.36
CHD3-215ENST00000572750 NR1I2O75469 434 aa17.27■□□□□ 0.36
CHD3-215ENST00000572750 FGF18O76093 207 aa17.27■□□□□ 0.36
CHD3-215ENST00000572750 RB1P06400 928 aa17.27■□□□□ 0.36
CHD3-215ENST00000572750 GRIK3Q13003 919 aa17.27■□□□□ 0.36
CHD3-215ENST00000572750 SNW1Q13573 536 aaKnown RBP17.27■□□□□ 0.36
CHD3-215ENST00000572750 GLRA4Q5JXX5 417 aa17.27■□□□□ 0.36
CHD3-215ENST00000572750 ZBTB41Q5SVQ8 909 aa17.27■□□□□ 0.36
CHD3-215ENST00000572750 TMEM173Q86WV6 379 aaPredicted RBP17.27■□□□□ 0.36
CHD3-215ENST00000572750 ENGASEQ8NFI3 743 aa17.27■□□□□ 0.36
CHD3-215ENST00000572750 P2RX5Q93086 422 aa17.27■□□□□ 0.36
CHD3-215ENST00000572750 ACCSQ96QU6 501 aa17.27■□□□□ 0.36
CHD3-215ENST00000572750 EXOC1Q9NV70 894 aa17.27■□□□□ 0.36
CHD3-215ENST00000572750 CACNG4Q9UBN1 327 aa17.27■□□□□ 0.36
CHD3-215ENST00000572750 PCDHB13Q9Y5F0 798 aa17.27■□□□□ 0.36
CHD3-215ENST00000572750 MYO15AQ9UKN7 3530 aa17.27■□□□□ 0.35
CHD3-215ENST00000572750 PVALEFA0A1B0GWK0 134 aa17.26■□□□□ 0.35
CHD3-215ENST00000572750 MEFVO15553 781 aaPredicted RBP17.26■□□□□ 0.35
CHD3-215ENST00000572750 FAM189A1O60320 539 aa17.26■□□□□ 0.35
CHD3-215ENST00000572750 MYL1P05976 194 aa17.26■□□□□ 0.35
CHD3-215ENST00000572750 DNAJB1P25685 340 aa17.26■□□□□ 0.35
CHD3-215ENST00000572750 TNFSF9P41273 254 aa17.26■□□□□ 0.35
CHD3-215ENST00000572750 SLC11A1P49279 550 aa17.26■□□□□ 0.35
CHD3-215ENST00000572750 YARSP54577 528 aaKnown RBP17.26■□□□□ 0.35
CHD3-215ENST00000572750 DPYDQ12882 1025 aa17.26■□□□□ 0.35
CHD3-215ENST00000572750 KMT5BQ4FZB7 885 aa17.26■□□□□ 0.35
CHD3-215ENST00000572750 SYCP3Q8IZU3 236 aa17.26■□□□□ 0.35
CHD3-215ENST00000572750 SLC39A11Q8N1S5 342 aa17.26■□□□□ 0.35
CHD3-215ENST00000572750 BCL7CQ8WUZ0 217 aaPredicted RBP17.26■□□□□ 0.35
CHD3-215ENST00000572750 FAM193BQ96PV7 902 aaPredicted RBP17.26■□□□□ 0.35
CHD3-215ENST00000572750 MSTO1Q9BUK6 570 aa17.26■□□□□ 0.35
CHD3-215ENST00000572750 SLC39A2Q9NP94 309 aa17.26■□□□□ 0.35
CHD3-215ENST00000572750 KANSL3Q9P2N6 904 aa17.26■□□□□ 0.35
CHD3-215ENST00000572750 EXOC7Q9UPT5 735 aa17.26■□□□□ 0.35
CHD3-215ENST00000572750 A0A0B4J269 797 aa17.25■□□□□ 0.35
CHD3-215ENST00000572750 EIF3DO15371 548 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHD3-215ENST00000572750 RPN1P04843 607 aaKnown RBP17.25■□□□□ 0.35
CHD3-215ENST00000572750 CXCL8P10145 99 aa17.25■□□□□ 0.35
CHD3-215ENST00000572750 HOXD13P35453 343 aa17.25■□□□□ 0.35
CHD3-215ENST00000572750 PPM1AP35813 382 aa17.25■□□□□ 0.35
CHD3-215ENST00000572750 ALDH7A1P49419 539 aaKnown RBP17.25■□□□□ 0.35
CHD3-215ENST00000572750 DSC1Q08554 894 aa17.25■□□□□ 0.35
CHD3-215ENST00000572750 PNOCQ13519 176 aa17.25■□□□□ 0.35
CHD3-215ENST00000572750 POSTNQ15063 836 aa17.25■□□□□ 0.35
CHD3-215ENST00000572750 STXBP4Q6ZWJ1 553 aa17.25■□□□□ 0.35
CHD3-215ENST00000572750 EPM2AIP1Q7L775 607 aaPredicted RBP17.25■□□□□ 0.35
CHD3-215ENST00000572750 COLGALT2Q8IYK4 626 aa17.25■□□□□ 0.35
CHD3-215ENST00000572750 KIAA0895Q8NCT3 520 aa17.25■□□□□ 0.35
CHD3-215ENST00000572750 MRPL38Q96DV4 380 aaKnown RBP17.25■□□□□ 0.35
CHD3-215ENST00000572750 FBXL18Q96ME1 805 aa17.25■□□□□ 0.35
CHD3-215ENST00000572750 ACAP3Q96P50 834 aa17.25■□□□□ 0.35
CHD3-215ENST00000572750 TOPORSQ9NS56 1045 aaPredicted RBP17.25■□□□□ 0.35
CHD3-215ENST00000572750 COG5Q9UP83 839 aa17.25■□□□□ 0.35
CHD3-215ENST00000572750 PRG3Q9Y2Y8 225 aaPredicted RBP17.25■□□□□ 0.35
CHD3-215ENST00000572750 UBE4BO95155 1302 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 F8W810 466 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 OGTO15294 1046 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 GALTP07902 379 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 ADSSP30520 456 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 CAMK1Q14012 370 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 PTPROQ16827 1216 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 NELFCDQ8IXH7 590 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 SPPL3Q8TCT6 385 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 SCFD1Q8WVM8 642 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 POF1BQ8WVV4 589 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 POMGNT1Q8WZA1 660 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 RABGGTAQ92696 567 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 PHOX2BQ99453 314 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 TMEM175Q9BSA9 504 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 SPG21Q9NZD8 308 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 PCDHGC5Q9Y5F6 944 aa17.24■□□□□ 0.35
CHD3-215ENST00000572750 CASTOR2A6NHX0 329 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 KINO60870 393 aaKnown RBP17.23■□□□□ 0.35
CHD3-215ENST00000572750 PRPF40AO75400 957 aaKnown RBP17.23■□□□□ 0.35
CHD3-215ENST00000572750 THP07101 528 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 IRS1P35568 1242 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 OR1G1P47890 313 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 UBE2HP62256 183 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 STK4Q13043 487 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 NAB2Q15742 525 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 ENOX2Q16206 610 aaKnown RBP17.23■□□□□ 0.35
CHD3-215ENST00000572750 ERCC4Q92889 916 aaPredicted RBP17.23■□□□□ 0.35
CHD3-215ENST00000572750 HLA-CQ95604 372 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 TMEM169Q96HH4 297 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 CCDC34Q96HJ3 373 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 IGSF21Q96ID5 467 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 ZMAT2Q96NC0 199 aaKnown RBP17.23■□□□□ 0.35
CHD3-215ENST00000572750 PPP1R10Q96QC0 940 aaKnown RBP17.23■□□□□ 0.35
CHD3-215ENST00000572750 PAAF1Q9BRP4 392 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 CBWD1Q9BRT8 395 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 TMEM206Q9H813 350 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 MARCH5Q9NX47 278 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 CNTN3Q9P232 1028 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 AGO2Q9UKV8 859 aaKnown RBP17.23■□□□□ 0.35
CHD3-215ENST00000572750 STYXL1Q9Y6J8 313 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 ZNF318Q5VUA4 2279 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 MYO7AQ13402 2215 aa17.23■□□□□ 0.35
CHD3-215ENST00000572750 SPTBN4Q9H254 2564 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms