RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 USP25Q9UHP3 1055 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 SMIM28A0A1B0GU29 152 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 TTC26A0AVF1 554 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 GOLGA8IPA6NC78 632 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 GOLGA8JA6NMD2 632 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 LACTBL1A8MY62 500 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 H0YCG3 227 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 FSCN2O14926 492 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 CLDN3O15551 220 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 EFEMP2O95967 443 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 RB1P06400 928 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 POU3F3P20264 500 aaPredicted RBP7.63□□□□□ -1.19
SMG6-209ENST00000571442 ACOT2P49753 483 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 RBM10P98175 930 aaKnown RBP7.63□□□□□ -1.19
SMG6-209ENST00000571442 GRIK3Q13003 919 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 POSTNQ15063 836 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 BMT2Q1RMZ1 405 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 CLEC17AQ6ZS10 378 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 SMYD4Q8IYR2 804 aaPredicted RBP7.63□□□□□ -1.19
SMG6-209ENST00000571442 C3orf58Q8NDZ4 430 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 FEZF2Q8TBJ5 459 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 URGCPQ8TCY9 931 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 HASPINQ8TF76 798 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 AUTS2Q8WXX7 1259 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 PPM1EQ8WY54 764 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 P2RX5Q93086 422 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 C18orf25Q96B23 403 aaPredicted RBP7.63□□□□□ -1.19
SMG6-209ENST00000571442 HVCN1Q96D96 273 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 SAAL1Q96ER3 474 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 IGSF21Q96ID5 467 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 B3GALT6Q96L58 329 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 ZNF558Q96NG5 402 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 ACAP3Q96P50 834 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 ACCSQ96QU6 501 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 PYM1Q9BRP8 204 aaKnown RBP7.63□□□□□ -1.19
SMG6-209ENST00000571442 MSTO1Q9BUK6 570 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 PLVAPQ9BX97 442 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 MRPL9Q9BYD2 267 aaKnown RBP7.63□□□□□ -1.19
SMG6-209ENST00000571442 LRRC27Q9C0I9 530 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 PCIF1Q9H4Z3 704 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 LMBRD1Q9NUN5 540 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 CNTN3Q9P232 1028 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 TUBGCP4Q9UGJ1 667 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 KCNG1Q9UIX4 513 aa7.63□□□□□ -1.19
SMG6-209ENST00000571442 CPSF3Q9UKF6 684 aaKnown RBP7.63□□□□□ -1.19
SMG6-209ENST00000571442 PRG3Q9Y2Y8 225 aaPredicted RBP7.63□□□□□ -1.19
SMG6-209ENST00000571442 SCN1AP35498 2009 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 GOLGA6L4A6NEF3 574 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 HIDE1A8MVS5 230 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 PPEF2O14830 753 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 CLIC2O15247 247 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 OGTO15294 1046 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 EIF3DO15371 548 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMG6-209ENST00000571442 RHOBTB3O94955 611 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 KIF4AO95239 1232 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 ADRB2P07550 413 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 NFICP08651 508 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 BMP6P22004 513 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 MATR3P43243 847 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMG6-209ENST00000571442 OR1G1P47890 313 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 CLCNKBP51801 687 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 PLCB3Q01970 1234 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 RNASELQ05823 741 aaKnown RBP7.62□□□□□ -1.19
SMG6-209ENST00000571442 ZBTB6Q15916 424 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 TCEAL5Q5H9L2 206 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 TJAP1Q5JTD0 557 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 ISM2Q6H9L7 571 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 EFCAB13Q8IY85 973 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 RNF168Q8IYW5 571 aaPredicted RBP7.62□□□□□ -1.19
SMG6-209ENST00000571442 SPATA20Q8TB22 786 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 POMGNT1Q8WZA1 660 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 MRPL38Q96DV4 380 aaKnown RBP7.62□□□□□ -1.19
SMG6-209ENST00000571442 RPS6KC1Q96S38 1066 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 TMEM175Q9BSA9 504 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 C11orf84Q9BUA3 381 aaPredicted RBP7.62□□□□□ -1.19
SMG6-209ENST00000571442 CCDC94Q9BW85 323 aaPredicted RBP7.62□□□□□ -1.19
SMG6-209ENST00000571442 GPR62Q9BZJ7 368 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 GZF1Q9H116 711 aaPredicted RBP7.62□□□□□ -1.19
SMG6-209ENST00000571442 ZBP1Q9H171 429 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 KCTD10Q9H3F6 313 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 UBN1Q9NPG3 1134 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 AGPAT3Q9NRZ7 376 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 EXOC1Q9NV70 894 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 RNF216Q9NWF9 866 aaPredicted RBP7.62□□□□□ -1.19
SMG6-209ENST00000571442 SPG21Q9NZD8 308 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 AGO2Q9UKV8 859 aaKnown RBP7.62□□□□□ -1.19
SMG6-209ENST00000571442 MAPK8IP1Q9UQF2 711 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 RWDD3Q9Y3V2 267 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 PCDHB13Q9Y5F0 798 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 PCDHB12Q9Y5F1 795 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 PCDHA5Q9Y5H7 936 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 BRWD1Q9NSI6 2320 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 PLXNA3P51805 1871 aa7.62□□□□□ -1.19
SMG6-209ENST00000571442 PTPRJQ12913 1337 aa7.61□□□□□ -1.19
SMG6-209ENST00000571442 I3L4J1 428 aa7.61□□□□□ -1.19
SMG6-209ENST00000571442 PER2O15055 1255 aa7.61□□□□□ -1.19
SMG6-209ENST00000571442 LINC01565O15544 149 aa7.61□□□□□ -1.19
SMG6-209ENST00000571442 THP07101 528 aa7.61□□□□□ -1.19
SMG6-209ENST00000571442 CLTAP09496 248 aa7.61□□□□□ -1.19
SMG6-209ENST00000571442 KCNE1P15382 129 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms