RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 C2CD2Q9Y426 696 aa12.92□□□□□ -0.34
CDRT1-206ENST00000571263 TTC26A0AVF1 554 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 LRRIQ3A6PVS8 624 aaPredicted RBP12.91□□□□□ -0.34
CDRT1-206ENST00000571263 KIAA0355O15063 1070 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 CXCL10P02778 98 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 DLATP10515 647 aaKnown RBP12.91□□□□□ -0.34
CDRT1-206ENST00000571263 ITGA4P13612 1032 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 MXI1P50539 228 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 MYL7Q01449 175 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 SYCP1Q15431 976 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 ENOX2Q16206 610 aaKnown RBP12.91□□□□□ -0.34
CDRT1-206ENST00000571263 PLEKHG4Q58EX7 1191 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 UBXN11Q5T124 520 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 SLC24A5Q71RS6 500 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 CDR2LQ86X02 465 aaPredicted RBP12.91□□□□□ -0.34
CDRT1-206ENST00000571263 EHBP1Q8NDI1 1231 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 FBXL13Q8NEE6 735 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 NUCKS1Q9H1E3 243 aaKnown RBP12.91□□□□□ -0.34
CDRT1-206ENST00000571263 PDE11AQ9HCR9 933 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 RGS18Q9NS28 235 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 INTS13Q9NVM9 706 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 FBXL5Q9UKA1 691 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 GIT1Q9Y2X7 761 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 R3HCC1Q9Y3T6 440 aaKnown RBP12.91□□□□□ -0.34
CDRT1-206ENST00000571263 IPPQ9Y573 584 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 PCDHB2Q9Y5E7 798 aa12.91□□□□□ -0.34
CDRT1-206ENST00000571263 A0A1W2PQJ5 194 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 NRDCO43847 1150 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 PHACTR2O75167 634 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 TIMP1P01033 207 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 C4BPAP04003 597 aaKnown RBP12.9□□□□□ -0.34
CDRT1-206ENST00000571263 PFKMP08237 780 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 TMEM191BP0C7N4 346 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 TRIM21P19474 475 aaKnown RBP12.9□□□□□ -0.34
CDRT1-206ENST00000571263 TNFSF9P41273 254 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 GCLMP48507 274 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 OSTNP61366 133 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 DLG4P78352 724 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 LRRC26Q2I0M4 334 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 TSR1Q2NL82 804 aaKnown RBP12.9□□□□□ -0.34
CDRT1-206ENST00000571263 SLC10A6Q3KNW5 377 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 ZACNQ401N2 412 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 XKR4Q5GH76 650 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 C15orf39Q6ZRI6 1047 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 SV2AQ7L0J3 742 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 TMC6Q7Z403 805 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 UBE2Q1Q7Z7E8 422 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 CNGA4Q8IV77 575 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 RPUSD2Q8IZ73 545 aaKnown RBP12.9□□□□□ -0.34
CDRT1-206ENST00000571263 TMEM199Q8N511 208 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 ZSWIM2Q8NEG5 633 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 TAF4BQ92750 862 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 FAXDC2Q96IV6 333 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 ADAM2Q99965 735 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 HTATIP2Q9BUP3 242 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 EIF2AQ9BY44 585 aaKnown RBP12.9□□□□□ -0.34
CDRT1-206ENST00000571263 TMEM117Q9H0C3 514 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 ELAC1Q9H777 363 aaKnown RBP12.9□□□□□ -0.34
CDRT1-206ENST00000571263 MMRN2Q9H8L6 949 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 SNTG2Q9NY99 539 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 PRKAG2Q9UGJ0 569 aa12.9□□□□□ -0.34
CDRT1-206ENST00000571263 LACTBL1A8MY62 500 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 EFCAB14O75071 495 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 PTMAP06454 111 aaKnown RBP12.89□□□□□ -0.35
CDRT1-206ENST00000571263 TRIM49P0CI25 452 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 TRIM49CP0CI26 452 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 CXCL8P10145 99 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 KCNE1P15382 129 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 EN2P19622 333 aaPredicted RBP12.89□□□□□ -0.35
CDRT1-206ENST00000571263 CYP3A5P20815 502 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 FAM189BP81408 668 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 PPP3CAQ08209 521 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 KCNMA1Q12791 1236 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 SEZ6Q53EL9 994 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 WDR44Q5JSH3 913 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 ZBTB41Q5SVQ8 909 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 C1orf220Q5T0J3 134 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 ALKAL1Q6UXT8 129 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 ENOSF1Q7L5Y1 443 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 CEP120Q8N960 986 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 BEST2Q8NFU1 509 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 PLEKHO2Q8TD55 490 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 IMPG2Q9BZV3 1241 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
CDRT1-206ENST00000571263 TMX1Q9H3N1 280 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 SLC38A7Q9NVC3 462 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 RAB20Q9NX57 234 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 CNTN3Q9P232 1028 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 PARP2Q9UGN5 583 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 MYO6Q9UM54 1294 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 CAPN11Q9UMQ6 739 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 UBQLN1Q9UMX0 589 aaKnown RBP12.89□□□□□ -0.35
CDRT1-206ENST00000571263 SIK3Q9Y2K2 1263 aa12.89□□□□□ -0.35
CDRT1-206ENST00000571263 LUC7L2Q9Y383 392 aaKnown RBP12.89□□□□□ -0.35
CDRT1-206ENST00000571263 AKR1B15C9JRZ8 316 aaPredicted RBP12.88□□□□□ -0.35
CDRT1-206ENST00000571263 HOXA2O43364 376 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 NBNO60934 754 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 RAG1P15918 1043 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 PAX3P23760 479 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms