RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 DDX53Q86TM3 631 aaKnown RBP7.25□□□□□ -1.25
SMG6-204ENST00000570606 TMEM173Q86WV6 379 aaPredicted RBP7.25□□□□□ -1.25
SMG6-204ENST00000570606 GLYCTKQ8IVS8 523 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 KSR1Q8IVT5 923 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 UBALD2Q8IYN6 164 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 FAM177A1Q8N128 213 aaPredicted RBP7.25□□□□□ -1.25
SMG6-204ENST00000570606 C12orf76Q8N812 135 aaPredicted RBP7.25□□□□□ -1.25
SMG6-204ENST00000570606 PSPC1Q8WXF1 523 aaKnown RBP7.25□□□□□ -1.25
SMG6-204ENST00000570606 ATOH1Q92858 354 aaPredicted RBP7.25□□□□□ -1.25
SMG6-204ENST00000570606 IGSF21Q96ID5 467 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 CEP170P1Q96L14 293 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 CCDC43Q96MW1 224 aaKnown RBP7.25□□□□□ -1.25
SMG6-204ENST00000570606 AIFM3Q96NN9 605 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 FAM193BQ96PV7 902 aaPredicted RBP7.25□□□□□ -1.25
SMG6-204ENST00000570606 LXNQ9BS40 222 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 EMILIN2Q9BXX0 1053 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 IRF2BPLQ9H1B7 796 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 MFSD1Q9H3U5 465 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 NRDE2Q9H7Z3 1164 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 SFXN1Q9H9B4 322 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 RSAD1Q9HA92 442 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 CYP26B1Q9NR63 512 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 AGPAT5Q9NUQ2 364 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 DNAJB4Q9UDY4 337 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 KCNJ14Q9UNX9 436 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 CNTNAP2Q9UHC6 1331 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 DOCK8Q8NF50 2099 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 MEIS3P2A8K0S8 358 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 EML1O00423 815 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 CCNT1O60563 726 aaKnown RBP7.24□□□□□ -1.25
SMG6-204ENST00000570606 GFRA3O60609 400 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 MAFO75444 373 aaPredicted RBP7.24□□□□□ -1.25
SMG6-204ENST00000570606 OFD1O75665 1012 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 ERLIN2O94905 339 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 STBD1O95210 358 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 URODP06132 367 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 ASGR2P07307 311 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 GALTP07902 379 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 SRGAP2CP0DJJ0 459 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 GCFC2P16383 781 aaKnown RBP7.24□□□□□ -1.25
SMG6-204ENST00000570606 NPR3P17342 541 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 KLRC2P26717 231 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 AVPR2P30518 371 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 NPEPPSP55786 919 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 MARSP56192 900 aaKnown RBP7.24□□□□□ -1.25
SMG6-204ENST00000570606 EVCP57679 992 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 CENPCQ03188 943 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 PPP2R5CQ13362 524 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 EMC2Q15006 297 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 PTPN14Q15678 1187 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 NPY5RQ15761 445 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 ATAT1Q5SQI0 421 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 B3GNT9Q6UX72 402 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 TMC5Q6UXY8 1006 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 CCDC149Q6ZUS6 474 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 SRGAP1Q7Z6B7 1085 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 NEK8Q86SG6 692 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 PPFIBP1Q86W92 1011 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 EXOC8Q8IYI6 725 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 MEIOBQ8N635 442 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 BCL7CQ8WUZ0 217 aaPredicted RBP7.24□□□□□ -1.25
SMG6-204ENST00000570606 TMEM143Q96AN5 459 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 ACSF2Q96CM8 615 aaPredicted RBP7.24□□□□□ -1.25
SMG6-204ENST00000570606 ZNF274Q96GC6 653 aaPredicted RBP7.24□□□□□ -1.25
SMG6-204ENST00000570606 MBOAT7Q96N66 472 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 CEP89Q96ST8 783 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 NAP1L4Q99733 375 aaKnown RBP7.24□□□□□ -1.25
SMG6-204ENST00000570606 SAP130Q9H0E3 1048 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 PDRG1Q9NUG6 133 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 STK39Q9UEW8 545 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 VAV3Q9UKW4 847 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 PPME1Q9Y570 386 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 PCDHB2Q9Y5E7 798 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 GVINP1Q7Z2Y8 2422 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 CFAP54Q96N23 3096 aa7.24□□□□□ -1.25
SMG6-204ENST00000570606 MTCL1Q9Y4B5 1905 aaKnown RBP7.24□□□□□ -1.25
SMG6-204ENST00000570606 C2CD2LO14523 706 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 GAS2O43903 313 aaKnown RBP7.23□□□□□ -1.25
SMG6-204ENST00000570606 B4GALT3O60512 393 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 ZNF623O75123 536 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 P4HBP07237 508 aaKnown RBP7.23□□□□□ -1.25
SMG6-204ENST00000570606 YWHABP31946 246 aaKnown RBP7.23□□□□□ -1.25
SMG6-204ENST00000570606 AK2P54819 239 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 RELBQ01201 579 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 CYP4A11Q02928 519 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 LAMTOR4Q0VGL1 99 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 XKR9Q5GH70 373 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 KANK3Q6NY19 840 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 ELMSAN1Q6PJG2 1045 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 AGMOQ6ZNB7 445 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 PIK3AP1Q6ZUJ8 805 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 OTOP3Q7RTS5 596 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 ZNF280BQ86YH2 543 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 ZDHHC14Q8IZN3 488 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 RNF149Q8NC42 400 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 FLCNQ8NFG4 579 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 ZDHHC1Q8WTX9 485 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 TCP11Q8WWU5 503 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 HPS1Q92902 700 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 FAM20AQ96MK3 541 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms