RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 PPM1LQ5SGD2 360 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 NT5DC1Q5TFE4 455 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 CYP26C1Q6V0L0 522 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 HDAC7Q8WUI4 952 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 PIK3R5Q8WYR1 880 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 NKD2Q969F2 451 aaPredicted RBP9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 PRIMPOLQ96LW4 560 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 RTP3Q9BQQ7 232 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 ADPGKQ9BRR6 497 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 CCDC113Q9H0I3 377 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 C2orf40Q9H1Z8 148 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 BHMT2Q9H2M3 363 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 TBC1D17Q9HA65 648 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 GOLGA2P5Q9HBQ8 144 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 ZDHHC7Q9NXF8 308 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 WNT16Q9UBV4 365 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 FBXW11Q9UKB1 542 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 KIAA1024Q9UPX6 916 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 CFAP54Q96N23 3096 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 GPR179Q6PRD1 2367 aa9.49□□□□□ -0.89
CTDNEP1-203ENST00000570385 CCDC169A6NNP5 214 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 PP2D1A8MPX8 630 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 PROB1E7EW31 1015 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 LRRN2O75325 713 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 B3GAT3O94766 335 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 SRFP11831 508 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 CDC25AP30304 524 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 OR1D2P34982 312 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 BRCC3P46736 316 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 CLCNKBP51801 687 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 GPC5P78333 572 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 CREMQ03060 361 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 HTR4Q13639 388 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 LIN9Q5TKA1 542 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 ATF7IP2Q5U623 682 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 PARM1Q6UWI2 310 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 RSPO2Q6UXX9 243 aaPredicted RBP9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 ADSSL1Q8N142 457 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 CEP120Q8N960 986 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 FAM184AQ8NB25 1140 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 ITFG1Q8TB96 612 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 SLC7A14Q8TBB6 771 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 KCNG4Q8TDN1 519 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 ING5Q8WYH8 240 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 FGF14Q92915 247 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 IFT74Q96LB3 600 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 RHOBTB2Q9BYZ6 727 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 FOXQ1Q9C009 403 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 FOXP1Q9H334 677 aaPredicted RBP9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 DDX19AQ9NUU7 478 aaKnown RBP9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 HCFC1R1Q9NWW0 138 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 LIMCH1Q9UPQ0 1083 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 R4GN57 208 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 VWA8A3KMH1 1905 aa9.48□□□□□ -0.89
CTDNEP1-203ENST00000570385 SFI1A8K8P3 1242 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 ANHXE9PGG2 379 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 E9PMD0 336 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 K7ERI5 159 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 HARSP12081 509 aaKnown RBP9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 TKTP29401 623 aaKnown RBP9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 RBM25P49756 843 aaKnown RBP9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 ARPP19P56211 112 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 PEX3P56589 373 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 SOX4Q06945 474 aaPredicted RBP9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 SNW1Q13573 536 aaKnown RBP9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 PPP2R5AQ15172 486 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 ZRSR1Q15695 479 aaKnown RBP9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 AXDND1Q5T1B0 1012 aaPredicted RBP9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 HAUS3Q68CZ6 603 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 DCLRE1AQ6PJP8 1040 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 CD300LGQ6UXG3 332 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 GPR65Q8IYL9 337 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 C4orf32Q8N8J7 132 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 C3orf58Q8NDZ4 430 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 FBXO18Q8NFZ0 1043 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 SNX29Q8TEQ0 813 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 FGF13Q92913 245 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 KXD1Q9BQD3 176 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 ARHGEF3Q9NR81 526 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 LRWD1Q9UFC0 647 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 CDH7Q9ULB5 785 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 PCDHB6Q9Y5E3 794 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 CDY1Q9Y6F8 540 aa9.47□□□□□ -0.89
CTDNEP1-203ENST00000570385 COL4A3Q01955 1670 aa9.46□□□□□ -0.89
CTDNEP1-203ENST00000570385 F5P12259 2224 aa9.46□□□□□ -0.89
CTDNEP1-203ENST00000570385 HIP1RO75146 1068 aa9.46□□□□□ -0.9
CTDNEP1-203ENST00000570385 PAPLNO95428 1278 aa9.46□□□□□ -0.9
CTDNEP1-203ENST00000570385 FGFR3P22607 806 aa9.46□□□□□ -0.9
CTDNEP1-203ENST00000570385 TOB1P50616 345 aaPredicted RBP9.46□□□□□ -0.9
CTDNEP1-203ENST00000570385 FXR2P51116 673 aaKnown RBP eCLIP9.46□□□□□ -0.9
CTDNEP1-203ENST00000570385 EFNA5P52803 228 aa9.46□□□□□ -0.9
CTDNEP1-203ENST00000570385 RAD51AP2Q09MP3 1159 aa9.46□□□□□ -0.9
CTDNEP1-203ENST00000570385 ELAVL2Q12926 359 aaKnown RBP9.46□□□□□ -0.9
CTDNEP1-203ENST00000570385 PTGDRQ13258 359 aa9.46□□□□□ -0.9
CTDNEP1-203ENST00000570385 RAB33AQ14088 237 aa9.46□□□□□ -0.9
CTDNEP1-203ENST00000570385 IL17AQ16552 155 aa9.46□□□□□ -0.9
CTDNEP1-203ENST00000570385 DCAF4L1Q3SXM0 396 aa9.46□□□□□ -0.9
CTDNEP1-203ENST00000570385 ZNF568Q3ZCX4 644 aa9.46□□□□□ -0.9
CTDNEP1-203ENST00000570385 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms