RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 DRC7Q8IY82 874 aa16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 SMG8Q8ND04 991 aaKnown RBP16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 POP1Q99575 1024 aaKnown RBP16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 FTHL17Q9BXU8 183 aa16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 PARP2Q9UGN5 583 aa16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 ALPK3Q96L96 1907 aa16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 TRIM43BA6NCK2 446 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 CXCL10P02778 98 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 RAG1P15918 1043 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 GTF2H1P32780 548 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 RFC2P35250 354 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 MCCD1P59942 119 aaPredicted RBP16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 SYCP1Q15431 976 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 PLEKHG4Q58EX7 1191 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 TMC6Q7Z403 805 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 DEFB128Q7Z7B8 93 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 WDR49Q8IV35 697 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 VSTM4Q8IW00 320 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 DBF4BQ8NFT6 615 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 APBB2Q92870 758 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 TRIM43Q96BQ3 446 aaPredicted RBP16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 FAM84AQ96KN4 292 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 SNX27Q96L92 541 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 PCMTD1Q96MG8 357 aaPredicted RBP16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 A0A1W2PQC6 194 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 LACTBL1A8MY62 500 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 MEFVO15553 781 aaPredicted RBP16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 TIMP1P01033 207 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 ITGA4P13612 1032 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 AKAP5P24588 427 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 PBX1P40424 430 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 SLC10A6Q3KNW5 377 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 CBWD6Q4V339 395 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 CBWD3Q5JTY5 395 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 CBWD5Q5RIA9 395 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 CD302Q8IX05 232 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 LINC01599Q8WXQ3 324 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 TRAIPQ9BWF2 469 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 TMEM117Q9H0C3 514 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 RNF39Q9H2S5 420 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 ASB7Q9H672 318 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 TMEM8AQ9HCN3 771 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 PRKAG2Q9UGJ0 569 aa16.7■□□□□ 0.26
HERPUD1-219ENST00000570273 PTPRJQ12913 1337 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 TTC26A0AVF1 554 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 TMEM191BP0C7N4 346 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 SKIP12755 728 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 CLDN10P78369 228 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 CETN1Q12798 172 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 BIRC3Q13489 604 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 KRT39Q6A163 491 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 GBP6Q6ZN66 633 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 EFCAB13Q8IY85 973 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 C7orf61Q8IZ16 206 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 SPC24Q8NBT2 197 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 RNF169Q8NCN4 708 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 ANKRD36BP1Q96IX9 119 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 ERGIC2Q96RQ1 377 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 CRACR2AQ9BSW2 395 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 LSM14BQ9BX40 385 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 TSPYL2Q9H2G4 693 aaPredicted RBP16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 PLEKHA5Q9HAU0 1116 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 RGS18Q9NS28 235 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 C1orf112Q9NSG2 853 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 GCNT4Q9P109 453 aa16.69■□□□□ 0.26
HERPUD1-219ENST00000570273 A0A0U1RQF3 1178 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 GTPBP10A4D1E9 387 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 P4HA2O15460 535 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 TNNC2P02585 160 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 NFICP08651 508 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 KLK7P49862 253 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 AP3M2P53677 418 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 TFAMQ00059 246 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 CCDC173Q0VFZ6 552 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 TMEM132DQ14C87 1099 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 EXOC3L4Q17RC7 722 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 SPECC1LQ69YQ0 1117 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 JADE1Q6IE81 842 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 FAM43BQ6ZT52 329 aaPredicted RBP16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 MRPL10Q7Z7H8 261 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 ECHDC2Q86YB7 292 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 OR5B17Q8NGF7 314 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 LPPQ93052 612 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 PGBD4Q96DM1 585 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 KIF12Q96FN5 646 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 HTATIP2Q9BUP3 242 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 MTMR12Q9C0I1 747 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 KLK14Q9P0G3 267 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 SIK3Q9Y2K2 1263 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 ITIH6Q6UXX5 1313 aa16.68■□□□□ 0.26
HERPUD1-219ENST00000570273 GOLGA6L6A8MZA4 724 aa16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 ZNF623O75123 536 aa16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 ATF7P17544 494 aaPredicted RBP16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 ITGB8P26012 769 aa16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 DUOXA2Q1HG44 320 aa16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 TCTN1Q2MV58 587 aa16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 TDRD10Q5VZ19 366 aaKnown RBP16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 CNKSR3Q6P9H4 555 aa16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 SLC24A5Q71RS6 500 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms