RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 SOD2P04179 222 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 IDEP14735 1019 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 LIG4P49917 911 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 KCNQ1P51787 676 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 YARSP54577 528 aaKnown RBP12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 OSTNP61366 133 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 NUCB2P80303 420 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 AMPD3Q01432 767 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 HERC4Q5GLZ8 1057 aaPredicted RBP12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 TMEM184AQ6ZMB5 413 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 BICD1Q96G01 975 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 SNX27Q96L92 541 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 ZMAT2Q96NC0 199 aaKnown RBP12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 ACAP3Q96P50 834 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 C7orf25Q9BPX7 421 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 PAAF1Q9BRP4 392 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 PYM1Q9BRP8 204 aaKnown RBP12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 COLEC11Q9BWP8 271 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 MRPL44Q9H9J2 332 aaKnown RBP12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 PANK4Q9NVE7 773 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 HPSEQ9Y251 543 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 STYXL1Q9Y6J8 313 aa12.11□□□□□ -0.47
SHCBP1-207ENST00000569702 TRIP11Q15643 1979 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 C5orf42Q9H799 3197 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 FAM237AA0A1B0GTK4 181 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 ANKRD63C9JTQ0 380 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 H3BQ06 376 aaPredicted RBP12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 CLTAP09496 248 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 HARSP12081 509 aaKnown RBP12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 KCNE1P15382 129 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 HSP90AA2PQ14568 343 aaPredicted RBP12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 BMS1Q14692 1282 aaKnown RBP12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 PTPN14Q15678 1187 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 KYAT1Q16773 422 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 SLC10A6Q3KNW5 377 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 SEZ6Q53EL9 994 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 GLRA4Q5JXX5 417 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 TAS1R1Q7RTX1 841 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 CCDC65Q8IXS2 484 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 VN1R2Q8NFZ6 395 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 RABGGTAQ92696 567 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 MSLNLQ96KJ4 702 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 COL25A1Q9BXS0 654 aaPredicted RBP12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 CHST7Q9NS84 486 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 TBC1D7Q9P0N9 293 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 CLEC1BQ9P126 229 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 CNTN3Q9P232 1028 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 CACNG4Q9UBN1 327 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 ADAM28Q9UKQ2 775 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 PCDHB13Q9Y5F0 798 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 NCOR1O75376 2440 aa12.1□□□□□ -0.47
SHCBP1-207ENST00000569702 A0A1B0GVL5 298 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 A0A1W2PQ27 194 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 A0A1W2PQ64 194 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 A0A1W2PQD8 194 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 TTC26A0AVF1 554 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 CASTOR2A6NHX0 329 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 TMEM189-UBE2V1I3L0A0 370 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 OGTO15294 1046 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 ACTN4O43707 911 aaKnown RBP12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 KIF4AO95239 1232 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 ADRB2P07550 413 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 SLFN14P0C7P3 912 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 PFKFB1P16118 471 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 CASP5P51878 434 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 EHHADHQ08426 723 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 KCNA1Q09470 495 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 COASYQ13057 564 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 ALCAMQ13740 583 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 PUS10Q3MIT2 529 aaKnown RBP12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 L1TD1Q5T7N2 865 aaKnown RBP12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 KIAA0319Q5VV43 1072 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 SLFN12LQ6IEE8 588 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 FUT10Q6P4F1 479 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 EP400NLQ6ZTU2 488 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 GPR65Q8IYL9 337 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 AUTS2Q8WXX7 1259 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 HERC2P3Q9BVR0 1158 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 FGFBP2Q9BYJ0 223 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 GPR62Q9BZJ7 368 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 IKZF4Q9H2S9 585 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 PLEKHA5Q9HAU0 1116 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 SLC38A7Q9NVC3 462 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 CITO14578 2027 aa12.09□□□□□ -0.47
SHCBP1-207ENST00000569702 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 GRXCR2A6NFK2 248 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 TISP43B9A030 160 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 CLASP2O75122 1294 aaKnown RBP12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 TADA2AO75478 443 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 GCNT3O95395 438 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 CXCL8P10145 99 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 MYBP10242 640 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 ADSSP30520 456 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 TNFSF9P41273 254 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 MATR3P43243 847 aaKnown RBP eCLIP12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 NDUFV1P49821 464 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 CLCNKBP51801 687 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 ASIC1P78348 528 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 RBM10P98175 930 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms