RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 JAK1P23458 1154 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 PSMA4P25789 261 aaKnown RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 RSBN1Q5VWQ0 802 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 TRIM67Q6ZTA4 783 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 MICU2Q8IYU8 434 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 DIS3LQ8TF46 1054 aaKnown RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 MKNK1Q9BUB5 465 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 VPS45Q9NRW7 570 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 HERC5Q9UII4 1024 aaKnown RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 H3BRJ5 948 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 PENKP01210 267 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 PDHBP11177 359 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 TBXAS1P24557 533 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 RAD23AP54725 363 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 CBX3Q13185 183 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 NLRX1Q86UT6 975 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 OTULINQ96BN8 352 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 RBBP8Q99708 897 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 TIPINQ9BVW5 301 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 MLXIPQ9HAP2 919 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 ARHGEF10LQ9HCE6 1279 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 YTHDC2Q9H6S0 1430 aaKnown RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 RTN2O75298 545 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 LDHAP00338 332 aaKnown RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 COPB2P35606 906 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 SERPINH1P50454 418 aaKnown RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 IFRD2Q12894 506 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 MAPK7Q13164 816 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 ZNF846Q147U1 533 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 C16orf72Q14CZ0 275 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 USPL1Q5W0Q7 1092 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 THOC7Q6I9Y2 204 aaKnown RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 DGKHQ86XP1 1220 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 TMEM35BQ8NCS4 154 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 OSCP1Q8WVF1 389 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 CCDC126Q96EE4 140 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 NLRP3Q96P20 1036 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 BTBD9Q96Q07 612 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 DEPDC7Q96QD5 511 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 CEP44Q9C0F1 390 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 CCDC90BQ9GZT6 254 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 TMEM245Q9H330 911 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 WDR7Q9Y4E6 1490 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 RAD51CO43502 376 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 KCNQ3O43525 872 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 USP1O94782 785 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 PARNO95453 639 aaKnown RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 PDE6AP16499 860 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 TNNI1P19237 187 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 TKTP29401 623 aaKnown RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 E2F7Q96AV8 911 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 GDF3Q9NR23 364 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 PLK2Q9NYY3 685 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 C6orf203Q9P0P8 240 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 G3BP2Q9UN86 482 aaKnown RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 TLR3O15455 904 aaKnown RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 BAIAP3O94812 1187 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 SRGAP2CP0DJJ0 459 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ACAT1P24752 427 aaKnown RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 CA8P35219 290 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 PMS1P54277 932 aaKnown RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 DRG2P55039 364 aaKnown RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 KCNQ4P56696 695 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 SFR1Q86XK3 245 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 TTC30BQ8N4P2 665 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ENKURQ8TC29 256 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 STAMQ92783 540 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ARHGEF1Q92888 912 aaKnown RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 LRMDAQ9H2I8 198 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 KLHL31Q9H511 634 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 PDXKO00764 312 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 GAS7O60861 476 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ATP2C1P98194 919 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 SCRN3Q0VDG4 424 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 DNAJC3Q13217 504 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ITPRIPL1Q6GPH6 555 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 SLFN12LQ6IEE8 588 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 PLEKHA7Q6IQ23 1121 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 TRIM65Q6PJ69 517 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 IP6K1Q92551 441 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 COX4I2Q96KJ9 171 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 PIH1D3Q9NQM4 214 aaKnown RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 WDR35Q9P2L0 1181 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 DSEQ9UL01 958 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 KLHL20Q9Y2M5 609 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ARHGEF5Q12774 1597 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 DNALI1O14645 258 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ENO1P06733 434 aaKnown RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ALADP13716 330 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 HADHAP40939 763 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 AP3B2Q13367 1082 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 MYBPC2Q14324 1141 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 NCAPHQ15003 741 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 BARGINQ6ZT62 677 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ZNF677Q86XU0 584 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ZBTB8OSQ8IWT0 167 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 TEKT3Q9BXF9 490 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 RRN3Q9NYV6 651 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 SMARCAL1Q9NZC9 954 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms