RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 TMEM40Q8WWA1 233 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 NXPE3Q969Y0 559 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 PLD4Q96BZ4 506 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 GPRASP2Q96D09 838 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 CDHR1Q96JP9 859 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 ZBP1Q9H171 429 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 RBSNQ9H1K0 784 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 EPC1Q9H2F5 836 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 DCTPP1Q9H773 170 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 ARHGEF3Q9NR81 526 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 RNF19AQ9NV58 838 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 NOP53Q9NZM5 478 aaKnown RBP6.72□□□□□ -1.33
CDH13-212ENST00000569144 KANSL3Q9P2N6 904 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 FBXO4Q9UKT5 387 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 USP18Q9UMW8 372 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 ST3GAL5Q9UNP4 418 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 SMG5Q9UPR3 1016 aaKnown RBP6.72□□□□□ -1.33
CDH13-212ENST00000569144 CHD6Q8TD26 2715 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 MYO10Q9HD67 2058 aa6.72□□□□□ -1.33
CDH13-212ENST00000569144 SLC30A4O14863 429 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 N4BP1O75113 896 aaKnown RBP6.71□□□□□ -1.34
CDH13-212ENST00000569144 CTSAP10619 480 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 NID1P14543 1247 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 GLULP15104 373 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 TGM1P22735 817 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 CES1P23141 567 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 COL8A1P27658 744 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 AFF1P51825 1210 aaKnown RBP6.71□□□□□ -1.34
CDH13-212ENST00000569144 POLGP54098 1239 aaPredicted RBP6.71□□□□□ -1.34
CDH13-212ENST00000569144 DSC3Q14574 896 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 PLCB4Q15147 1175 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 MCMDC2Q4G0Z9 681 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 MTHFD1LQ6UB35 978 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 FAM228AQ86W67 206 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 HOMER1Q86YM7 354 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 VPS52Q8N1B4 723 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 SLC44A3Q8N4M1 653 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 ZBTB44Q8NCP5 570 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 NETO1Q8TDF5 533 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 TRAPPC12Q8WVT3 735 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 ATRIPQ8WXE1 791 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 RSAD2Q8WXG1 361 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 TMEM169Q96HH4 297 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 SPACA7Q96KW9 195 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 PIGSQ96S52 555 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 PCYT2Q99447 389 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 CHRDQ9H2X0 955 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 AZI2Q9H6S1 392 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 SH2B1Q9NRF2 756 aaPredicted RBP6.71□□□□□ -1.34
CDH13-212ENST00000569144 EPS15L1Q9UBC2 864 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 MAD2L2Q9UI95 211 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 FOXD3Q9UJU5 478 aaPredicted RBP6.71□□□□□ -1.34
CDH13-212ENST00000569144 GINS2Q9Y248 185 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 LOXHD1Q8IVV2 1947 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 USP24Q9UPU5 2620 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 FANCMQ8IYD8 2048 aa6.71□□□□□ -1.34
CDH13-212ENST00000569144 A0A0D9SFI3 127 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 ZNF213O14771 459 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 LAMTOR5O43504 91 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 TBC1D4O60343 1298 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 PHACTR2O75167 634 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 TNFRSF21O75509 655 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 KIF4AO95239 1232 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 MX1P20591 662 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 GBP2P32456 591 aaPredicted RBP6.7□□□□□ -1.34
CDH13-212ENST00000569144 ALDH7A1P49419 539 aaKnown RBP6.7□□□□□ -1.34
CDH13-212ENST00000569144 METAP2P50579 478 aaKnown RBP eCLIP6.7□□□□□ -1.34
CDH13-212ENST00000569144 CRYBB1P53674 252 aaPredicted RBP6.7□□□□□ -1.34
CDH13-212ENST00000569144 BCAR1P56945 870 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 STARD6P59095 220 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 PTPN14Q15678 1187 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 SLC35G1Q2M3R5 365 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 CLLU1OSQ5K130 101 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 IFIT1BQ5T764 474 aaKnown RBP6.7□□□□□ -1.34
CDH13-212ENST00000569144 DCLRE1AQ6PJP8 1040 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 CYP26C1Q6V0L0 522 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 PLPPR4Q7Z2D5 763 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 DDX53Q86TM3 631 aaKnown RBP6.7□□□□□ -1.34
CDH13-212ENST00000569144 ZNF589Q86UQ0 364 aaPredicted RBP6.7□□□□□ -1.34
CDH13-212ENST00000569144 TICAM2Q86XR7 235 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 KIAA0319LQ8IZA0 1049 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 TMEM151AQ8N4L1 468 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 CMASQ8NFW8 434 aaPredicted RBP6.7□□□□□ -1.34
CDH13-212ENST00000569144 SNX29Q8TEQ0 813 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 AUTS2Q8WXX7 1259 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 STAMQ92783 540 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 EVI5LQ96CN4 794 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 SHDQ96IW2 340 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 FAM227BQ96M60 508 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 MRPL9Q9BYD2 267 aaKnown RBP6.7□□□□□ -1.34
CDH13-212ENST00000569144 BCO2Q9BYV7 579 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 RHOBTB2Q9BYZ6 727 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 FOXQ1Q9C009 403 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 RIOX1Q9H6W3 641 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 WDR6Q9NNW5 1121 aaKnown RBP6.7□□□□□ -1.34
CDH13-212ENST00000569144 PARD6AQ9NPB6 346 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 SLC2A4RGQ9NR83 387 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 ZSCAN32Q9NX65 697 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 GMEB2Q9UKD1 530 aa6.7□□□□□ -1.34
CDH13-212ENST00000569144 ANGPTL2Q9UKU9 493 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms