RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 DAB2IPQ5VWQ8 1189 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 LRSAM1Q6UWE0 723 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.64□□□□□ -0.87
SMG1-216ENST00000569122 WDR5BQ86VZ2 330 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 MAP4K3Q8IVH8 894 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 ELMOD1Q8N336 334 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 FAM200AQ8TCP9 573 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 CSGALNACT1Q8TDX6 532 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 ING5Q8WYH8 240 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 SH2D3AQ9BRG2 576 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 EIF2AQ9BY44 585 aaKnown RBP9.64□□□□□ -0.87
SMG1-216ENST00000569122 PLA2G2FQ9BZM2 168 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 GPR88Q9GZN0 384 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 ARRDC1-AS1Q9H2J1 176 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 RNF39Q9H2S5 420 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 DHX33Q9H6R0 707 aaKnown RBP9.64□□□□□ -0.87
SMG1-216ENST00000569122 MINDY3Q9H8M7 445 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 VPS45Q9NRW7 570 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 PARP2Q9UGN5 583 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 EVPLQ92817 2033 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 CYP3A7-CYP3A51PA0A087WV96 503 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 SHISA7A6NL88 538 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 F8W810 466 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 INO80B-WBP1J3KQ70 363 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 SLC27A2O14975 620 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 TSPAN1O60635 241 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 AKAP3O75969 853 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 EPN2O95208 641 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 THP07101 528 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 P4HBP07237 508 aaKnown RBP9.63□□□□□ -0.87
SMG1-216ENST00000569122 CYP3A7P24462 503 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 GDI1P31150 447 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 OR1D2P34982 312 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 PTENP60484 403 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 RNF43Q68DV7 783 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 IQCEQ6IPM2 695 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 PSAPL1Q6NUJ1 521 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 SLC27A1Q6PCB7 646 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 ANKS3Q6ZW76 656 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 PDZD4Q76G19 769 aaPredicted RBP9.63□□□□□ -0.87
SMG1-216ENST00000569122 FERMT3Q86UX7 667 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 IFNLR1Q8IU57 520 aaPredicted RBP9.63□□□□□ -0.87
SMG1-216ENST00000569122 YAF2Q8IY57 180 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 LEMD2Q8NC56 503 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 SMARCD2Q92925 531 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 TMEM143Q96AN5 459 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 KIF12Q96FN5 646 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 LRRC2Q9BYS8 371 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 RXFP3Q9NSD7 469 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 HCFC1R1Q9NWW0 138 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 MTRRQ9UBK8 725 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 HES2Q9Y543 173 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 BACE2Q9Y5Z0 518 aa9.63□□□□□ -0.87
SMG1-216ENST00000569122 FASNP49327 2511 aaKnown RBP9.62□□□□□ -0.87
SMG1-216ENST00000569122 ASPMQ8IZT6 3477 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 ARHGEF37A1IGU5 675 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 TMEM150BA6NC51 233 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 C1QTNF9BB2RNN3 333 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 K7ESF4 209 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 PRRG1O14668 218 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 PRPF3O43395 683 aaKnown RBP9.62□□□□□ -0.87
SMG1-216ENST00000569122 ATG13O75143 517 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 C1QTNF9P0C862 333 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 GSPT1P15170 499 aaKnown RBP9.62□□□□□ -0.87
SMG1-216ENST00000569122 AKAP5P24588 427 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 CCNE1P24864 410 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 NOVA1P51513 510 aaKnown RBP9.62□□□□□ -0.87
SMG1-216ENST00000569122 KPNA1P52294 538 aaPredicted RBP9.62□□□□□ -0.87
SMG1-216ENST00000569122 FGD1P98174 961 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 GRM2Q14416 872 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 SF3A2Q15428 464 aaKnown RBP9.62□□□□□ -0.87
SMG1-216ENST00000569122 FAM78AQ5JUQ0 283 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 CREB3L3Q68CJ9 461 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 PLA2G4FQ68DD2 849 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 HEATR6Q6AI08 1181 aaKnown RBP9.62□□□□□ -0.87
SMG1-216ENST00000569122 MOXD1Q6UVY6 613 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 B3GNT9Q6UX72 402 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 DHX32Q7L7V1 743 aaKnown RBP9.62□□□□□ -0.87
SMG1-216ENST00000569122 MFSD6LQ8IWD5 586 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 C4orf19Q8IY42 314 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 GSTCDQ8NEC7 633 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 ZNF461Q8TAF7 563 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 GAB3Q8WWW8 586 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 CPB2Q96IY4 423 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 ASB16Q96NS5 453 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 MTRQ99707 1265 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 NFKBIZQ9BYH8 718 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 ADAM33Q9BZ11 813 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 SLKQ9H2G2 1235 aaPredicted RBP9.62□□□□□ -0.87
SMG1-216ENST00000569122 NXF3Q9H4D5 531 aaKnown RBP9.62□□□□□ -0.87
SMG1-216ENST00000569122 TRPV4Q9HBA0 871 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 MAFFQ9ULX9 164 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 LHX6Q9UPM6 363 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 C2orf16Q68DN1 1984 aa9.62□□□□□ -0.87
SMG1-216ENST00000569122 CEP295Q9C0D2 2601 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 DOCK8Q8NF50 2099 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 A0A1B0GUA9 196 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 RPP40O75818 363 aaKnown RBP9.61□□□□□ -0.87
SMG1-216ENST00000569122 HMGB1P09429 215 aaKnown RBP9.61□□□□□ -0.87
SMG1-216ENST00000569122 CCDC192P0DO97 292 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms