RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 C11orf96Q7Z7L8 435 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 PHKBQ93100 1093 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 GFM2Q969S9 779 aaKnown RBP7.11□□□□□ -1.27
UBR1-208ENST00000569066 SIGLEC10Q96LC7 697 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 P2RX7Q99572 595 aaKnown RBP7.11□□□□□ -1.27
UBR1-208ENST00000569066 F5H423 210 aaPredicted RBP7.11□□□□□ -1.27
UBR1-208ENST00000569066 F2RL2O00254 374 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 PHGDHO43175 533 aaKnown RBP7.11□□□□□ -1.27
UBR1-208ENST00000569066 TCEA3O75764 348 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 CYP7B1O75881 506 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 CD1AP06126 327 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 SLC7A1P30825 629 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 BPIFB4P59827 614 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 GPSM2P81274 684 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 TRIM14Q14142 442 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 ZNF827Q17R98 1081 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 KLHDC7AQ5VTJ3 777 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 SESTD1Q86VW0 696 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 FBXO15Q8NCQ5 510 aaPredicted RBP7.11□□□□□ -1.27
UBR1-208ENST00000569066 MTFMTQ96DP5 389 aaKnown RBP7.11□□□□□ -1.27
UBR1-208ENST00000569066 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.11□□□□□ -1.27
UBR1-208ENST00000569066 ZDHHC9Q9Y397 364 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 PRDX5P30044 214 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 CSF2RBP32927 897 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 IL6STP40189 918 aaPredicted RBP7.1□□□□□ -1.27
UBR1-208ENST00000569066 DUSP2Q05923 314 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 EXOSC9Q06265 439 aaKnown RBP7.1□□□□□ -1.27
UBR1-208ENST00000569066 RAB39AQ14964 217 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 SAPCD2Q86UD0 394 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 TNPO1Q92973 898 aaKnown RBP7.1□□□□□ -1.27
UBR1-208ENST00000569066 MRGPRX1Q96LB2 322 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 PTPN18Q99952 460 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 SLAMF7Q9NQ25 335 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 NCDNQ9UBB6 729 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 SLC23A1Q9UHI7 598 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 FEZ2Q9UHY8 353 aaPredicted RBP7.1□□□□□ -1.27
UBR1-208ENST00000569066 MYO1FO00160 1098 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 BRAFP15056 766 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 JUNBP17275 347 aaPredicted RBP7.1□□□□□ -1.27
UBR1-208ENST00000569066 HDCP19113 662 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 ADAM8P78325 824 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 INO80DQ53TQ3 878 aaPredicted RBP7.1□□□□□ -1.27
UBR1-208ENST00000569066 KHDC1LQ5JSQ8 128 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 MFSD14BQ5SR56 506 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 AFMIDQ63HM1 303 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 CNKSR3Q6P9H4 555 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 CARD11Q9BXL7 1154 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 LRRC27Q9C0I9 530 aa7.1□□□□□ -1.27
UBR1-208ENST00000569066 ATRNL1Q5VV63 1379 aa7.09□□□□□ -1.27
UBR1-208ENST00000569066 CCDC189A1A4V9 331 aa7.09□□□□□ -1.27
UBR1-208ENST00000569066 POM121BA6NF01 834 aa7.09□□□□□ -1.27
UBR1-208ENST00000569066 CYP1A1P04798 512 aaPredicted RBP7.09□□□□□ -1.27
UBR1-208ENST00000569066 TSHRP16473 764 aa7.09□□□□□ -1.27
UBR1-208ENST00000569066 ANO1Q5XXA6 986 aa7.09□□□□□ -1.27
UBR1-208ENST00000569066 ADAM7Q9H2U9 754 aa7.09□□□□□ -1.27
UBR1-208ENST00000569066 MRPL46Q9H2W6 279 aaKnown RBP7.09□□□□□ -1.27
UBR1-208ENST00000569066 CERS4Q9HA82 394 aa7.09□□□□□ -1.27
UBR1-208ENST00000569066 ALOX15P16050 662 aaPredicted RBP7.08□□□□□ -1.28
UBR1-208ENST00000569066 PAX3P23760 479 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 CRHR1P34998 444 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 WNT3AP56704 352 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 ZNF543Q08ER8 600 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 VMACQ2NL98 169 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 FAM209BQ5JX69 171 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 KRT40Q6A162 431 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 FAM90A1Q86YD7 464 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 PCSK9Q8NBP7 692 aaKnown RBP7.08□□□□□ -1.28
UBR1-208ENST00000569066 DEPTORQ8TB45 409 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 SLC35B2Q8TB61 432 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 GPHA2Q96T91 129 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 TMEM168Q9H0V1 697 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 OR10A2Q9H208 303 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 GJB4Q9NTQ9 266 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 TMEM140Q9NV12 185 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 NTMQ9P121 344 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 FFAR3O14843 346 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 KRT1P04264 644 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 STT3AP46977 705 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 ADCY7P51828 1080 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 SUMO3P55854 103 aaPredicted RBP7.08□□□□□ -1.28
UBR1-208ENST00000569066 FMO1Q01740 532 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 HGFACQ04756 655 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 RNF151Q2KHN1 245 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 C3orf38Q5JPI3 329 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 NBPF11Q86T75 865 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 AJUBAQ96IF1 538 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 VPS11Q9H270 941 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 PCDHGB2Q9Y5G2 931 aa7.08□□□□□ -1.28
UBR1-208ENST00000569066 FRS3O43559 492 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 STC2O76061 302 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 MATN4O95460 622 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 RAP2AP10114 183 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 SMARCA1P28370 1054 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 SLC6A4P31645 630 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 FLT3LGP49771 235 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 CNGA2Q16280 664 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 CCDC33Q8N5R6 958 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 TXNDC5Q8NBS9 432 aaKnown RBP7.07□□□□□ -1.28
UBR1-208ENST00000569066 CYFIP2Q96F07 1278 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 KCNH6Q9H252 994 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms