RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	CASTOR2	A6NHX0	329 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	NRG2	O14511	850 aa	Predicted RBP	18.8	■□□□□ 0.6
PKM-223	ENST00000569050	TM4SF5	O14894	197 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	RHO	P08100	348 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	ARF4	P18085	180 aa	Predicted RBP	18.8	■□□□□ 0.6
PKM-223	ENST00000569050	CYP3A7	P24462	503 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	RFC5	P40937	340 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	QARS	P47897	775 aa	Known RBP	18.8	■□□□□ 0.6
PKM-223	ENST00000569050	LIMK1	P53667	647 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	RAB33A	Q14088	237 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	PCBP1	Q15365	356 aa	Known RBP eCLIP	18.8	■□□□□ 0.6	3e-7	■■■■□ 23
PKM-223	ENST00000569050	UVSSA	Q2YD98	709 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	CDR2L	Q86X02	465 aa	Predicted RBP	18.8	■□□□□ 0.6
PKM-223	ENST00000569050	HACE1	Q8IYU2	909 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	CCDC148	Q8NFR7	591 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	ESYT1	Q9BSJ8	1104 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	BRD9	Q9H8M2	597 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	PPME1	Q9Y570	386 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	ZMYM2	Q9UBW7	1377 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	ANKRD11	Q6UB99	2663 aa	Predicted RBP	18.79	■□□□□ 0.6
PKM-223	ENST00000569050	INO80B-WBP1	J3KQ70	363 aa		18.79	■□□□□ 0.6
PKM-223	ENST00000569050	ASAP2	O43150	1006 aa		18.79	■□□□□ 0.6
PKM-223	ENST00000569050	FOXD2	O60548	495 aa	Predicted RBP	18.79	■□□□□ 0.6
PKM-223	ENST00000569050	NPTXR	O95502	500 aa		18.79	■□□□□ 0.6
PKM-223	ENST00000569050	CXCL12	P48061	93 aa		18.79	■□□□□ 0.6
PKM-223	ENST00000569050	MBTD1	Q05BQ5	628 aa		18.79	■□□□□ 0.6
PKM-223	ENST00000569050	ADCK5	Q3MIX3	580 aa		18.79	■□□□□ 0.6
PKM-223	ENST00000569050	EXOC8	Q8IYI6	725 aa		18.79	■□□□□ 0.6
PKM-223	ENST00000569050	FAM160A2	Q8N612	972 aa	Predicted RBP	18.79	■□□□□ 0.6
PKM-223	ENST00000569050	TCP11	Q8WWU5	503 aa		18.79	■□□□□ 0.6
PKM-223	ENST00000569050	FAM3C	Q92520	227 aa		18.79	■□□□□ 0.6
PKM-223	ENST00000569050	ANO2	Q9NQ90	1003 aa		18.79	■□□□□ 0.6
PKM-223	ENST00000569050	CCDC196	A0A1B0GTZ2	297 aa		18.78	■□□□□ 0.6
PKM-223	ENST00000569050	B4GALT5	O43286	388 aa		18.78	■□□□□ 0.6
PKM-223	ENST00000569050	CHRNB1	P11230	501 aa		18.78	■□□□□ 0.6
PKM-223	ENST00000569050	OR1D2	P34982	312 aa		18.78	■□□□□ 0.6
PKM-223	ENST00000569050	TUSC3	Q13454	348 aa		18.78	■□□□□ 0.6
PKM-223	ENST00000569050	SF3A2	Q15428	464 aa	Known RBP	18.78	■□□□□ 0.6
PKM-223	ENST00000569050	AASDH	Q4L235	1098 aa	Predicted RBP	18.78	■□□□□ 0.6
PKM-223	ENST00000569050	IFNLR1	Q8IU57	520 aa	Predicted RBP	18.78	■□□□□ 0.6
PKM-223	ENST00000569050	AVEN	Q9NQS1	362 aa	Predicted RBP	18.78	■□□□□ 0.6
PKM-223	ENST00000569050	RXFP3	Q9NSD7	469 aa		18.78	■□□□□ 0.6
PKM-223	ENST00000569050	PARP2	Q9UGN5	583 aa		18.78	■□□□□ 0.6
PKM-223	ENST00000569050	VAV3	Q9UKW4	847 aa		18.78	■□□□□ 0.6
PKM-223	ENST00000569050	PIAS3	Q9Y6X2	628 aa		18.78	■□□□□ 0.6
PKM-223	ENST00000569050		K7ESF4	209 aa		18.77	■□□□□ 0.6
PKM-223	ENST00000569050	CNR2	P34972	360 aa		18.77	■□□□□ 0.6
PKM-223	ENST00000569050	NCBP1	Q09161	790 aa	Known RBP	18.77	■□□□□ 0.6
PKM-223	ENST00000569050	FAM78A	Q5JUQ0	283 aa		18.77	■□□□□ 0.6
PKM-223	ENST00000569050	LONP2	Q86WA8	852 aa		18.77	■□□□□ 0.6
PKM-223	ENST00000569050	TRMT61B	Q9BVS5	477 aa	Known RBP	18.77	■□□□□ 0.6
PKM-223	ENST00000569050	ZNF334	Q9HCZ1	680 aa	Predicted RBP	18.77	■□□□□ 0.6
PKM-223	ENST00000569050	XPNPEP1	Q9NQW7	623 aa		18.77	■□□□□ 0.6
PKM-223	ENST00000569050	ZMIZ1	Q9ULJ6	1067 aa		18.77	■□□□□ 0.6
PKM-223	ENST00000569050	NID2	Q14112	1375 aa		18.77	■□□□□ 0.6
PKM-223	ENST00000569050	WDFY3	Q8IZQ1	3526 aa		18.77	■□□□□ 0.59
PKM-223	ENST00000569050	IGF2R	P11717	2491 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	C1QTNF9B	B2RNN3	333 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	PTGES	O14684	152 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	SLC37A4	O43826	429 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	C1QTNF9	P0C862	333 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	YWHAB	P31946	246 aa	Known RBP	18.76	■□□□□ 0.59
PKM-223	ENST00000569050	PPP2R5C	Q13362	524 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	PRSS36	Q5K4E3	855 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	HEATR6	Q6AI08	1181 aa	Known RBP	18.76	■□□□□ 0.59
PKM-223	ENST00000569050	PDXDC1	Q6P996	788 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	RTL10	Q7L3V2	364 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	MAP4K3	Q8IVH8	894 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	RASEF	Q8IZ41	740 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	SPEM1	Q8N4L4	309 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	IRF7	Q92985	503 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	TCEAL4	Q96EI5	215 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	MTR	Q99707	1265 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	LXN	Q9BS40	222 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	ZFP14	Q9HCL3	533 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	MTRR	Q9UBK8	725 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	CDY1	Q9Y6F8	540 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	VWA8	A3KMH1	1905 aa		18.76	■□□□□ 0.59
PKM-223	ENST00000569050	ZBTB39	O15060	712 aa		18.75	■□□□□ 0.59
PKM-223	ENST00000569050	DKC1	O60832	514 aa	Known RBP eCLIP	18.75	■□□□□ 0.59
PKM-223	ENST00000569050	PAPSS2	O95340	614 aa	Predicted RBP	18.75	■□□□□ 0.59
PKM-223	ENST00000569050	P4HB	P07237	508 aa	Known RBP	18.75	■□□□□ 0.59
PKM-223	ENST00000569050	IGFBP6	P24592	240 aa	Predicted RBP	18.75	■□□□□ 0.59
PKM-223	ENST00000569050	GDI1	P31150	447 aa		18.75	■□□□□ 0.59
PKM-223	ENST00000569050	HOXC13	P31276	330 aa		18.75	■□□□□ 0.59
PKM-223	ENST00000569050	IRX6	P78412	446 aa	Predicted RBP	18.75	■□□□□ 0.59
PKM-223	ENST00000569050	AKAP17A	Q02040	695 aa	Known RBP	18.75	■□□□□ 0.59
PKM-223	ENST00000569050	ELAVL2	Q12926	359 aa	Known RBP	18.75	■□□□□ 0.59
PKM-223	ENST00000569050	PTGDR	Q13258	359 aa		18.75	■□□□□ 0.59
PKM-223	ENST00000569050	CAPS	Q13938	189 aa		18.75	■□□□□ 0.59
PKM-223	ENST00000569050	NAB2	Q15742	525 aa		18.75	■□□□□ 0.59
PKM-223	ENST00000569050	CCDC6	Q16204	474 aa		18.75	■□□□□ 0.59
PKM-223	ENST00000569050	NTRK3	Q16288	839 aa		18.75	■□□□□ 0.59
PKM-223	ENST00000569050	RNF20	Q5VTR2	975 aa		18.75	■□□□□ 0.59
PKM-223	ENST00000569050	SLC27A1	Q6PCB7	646 aa		18.75	■□□□□ 0.59
PKM-223	ENST00000569050	VIT	Q6UXI7	678 aa		18.75	■□□□□ 0.59
PKM-223	ENST00000569050	UNQ6494/PRO21346	Q6UXR6	183 aa		18.75	■□□□□ 0.59
PKM-223	ENST00000569050	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	18.75	■□□□□ 0.59
PKM-223	ENST00000569050	ASAP3	Q8TDY4	903 aa		18.75	■□□□□ 0.59
PKM-223	ENST00000569050	ASB16	Q96NS5	453 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms