RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	GAST	P01350	101 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	VIL1	P09327	827 aa	Known RBP	4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	RBP3	P10745	1247 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	TGM1	P22735	817 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	CLRN1	P58418	232 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	REST	Q13127	1097 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	TSHZ3	Q63HK5	1081 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.18	□□□□□ -1.74
BBS4-215	ENST00000569001		Q6YL49	198 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	PDZD4	Q76G19	769 aa	Predicted RBP	4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	UBE3B	Q7Z3V4	1068 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	KRT26	Q7Z3Y9	468 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	SPATS2	Q86XZ4	545 aa	Known RBP	4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	ZGPAT	Q8N5A5	531 aa	Known RBP	4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	OR56A1	Q8NGH5	318 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	CCHCR1	Q8TD31	782 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	ASB10	Q8WXI3	467 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	MYEOV	Q96EZ4	313 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	DCLRE1C	Q96SD1	692 aa	Known RBP	4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	MRI1	Q9BV20	369 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	ADI1	Q9BV57	179 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	BCO1	Q9HAY6	547 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	FBXO34	Q9NWN3	711 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	SLC23A1	Q9UHI7	598 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	B3GALT2	O43825	422 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	PHF2	O75151	1096 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	SPDEF	O95238	335 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	ELANE	P08246	267 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	DDX6	P26196	483 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	IARS	P41252	1262 aa	Known RBP	4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	MCAM	P43121	646 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	MTNR1B	P49286	362 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	MALL	Q13021	153 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	CLUL1	Q15846	466 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	RRP12	Q5JTH9	1297 aa	Known RBP	4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	EGFLAM	Q63HQ2	1017 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	ZNF529	Q6P280	563 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	PLXDC1	Q8IUK5	500 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	DNAJC10	Q8IXB1	793 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	ZFP28	Q8NHY6	868 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	FATE1	Q969F0	183 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	RBM12	Q9NTZ6	932 aa	Known RBP	4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	USP25	Q9UHP3	1055 aa		4.17	□□□□□ -1.74
BBS4-215	ENST00000569001	MT-CO1	P00395	513 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	AMY1A	P04745	511 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	MTHFD2	P13995	350 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	ATP5J	P18859	108 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	MGAT1	P26572	445 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	GUCY1A2	P33402	732 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	AGAP9	Q5VTM2	703 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	CNTD1	Q8N815	330 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	NRG4	Q8WWG1	115 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	CYP4F11	Q9HBI6	524 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	LANCL2	Q9NS86	450 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	KLHL11	Q9NVR0	708 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	DKK2	Q9UBU2	259 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	ZBTB21	Q9ULJ3	1066 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	GPR45	Q9Y5Y3	372 aa		4.16	□□□□□ -1.74
BBS4-215	ENST00000569001	TCRBV7S2A1N4T	A0A589	114 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	MARCH11	A6NNE9	402 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	PJA2	O43164	708 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	NUDT3	O95989	172 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	SNRPA1	P09661	255 aa	Known RBP	4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	AGXT	P21549	392 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	PTH2R	P49190	550 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	HSD11B2	P80365	405 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	GUCY1B3	Q02153	619 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	OCA2	Q04671	838 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	SP140	Q13342	867 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	MAPKAPK5	Q8IW41	473 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	ARHGEF19	Q8IW93	802 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	LCORL	Q8N3X6	602 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	SLC44A3	Q8N4M1	653 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	PAWR	Q96IZ0	340 aa	Known RBP	4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	PACSIN3	Q9UKS6	424 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	INTU	Q9ULD6	942 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	CLCA2	Q9UQC9	943 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	ATP11B	Q9Y2G3	1177 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	FPGT-TNNI3K	V9GXZ4	949 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	COL4A3	Q01955	1670 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	SALL3	Q9BXA9	1300 aa		4.15	□□□□□ -1.75
BBS4-215	ENST00000569001	GAGE12B	A1L429	117 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	CDHR4	A6H8M9	788 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	GAGE12H	A6NDE8	117 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	KIAA0355	O15063	1070 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	KIAA0391	O15091	583 aa	Known RBP	4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	CLSTN1	O94985	981 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	CFI	P05156	583 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	ITGAM	P11215	1152 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	CPE	P16870	476 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	FGFR4	P22455	802 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	SLC5A3	P53794	718 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	EVA1C	P58658	441 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	SCAP	Q12770	1279 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	FOXI1	Q12951	378 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	KLF1	Q13351	362 aa	Predicted RBP	4.14	□□□□□ -1.75

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