RNA–Protein interactions for RNA: ENST00000568983.5

FANCA-232, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-232ENST00000568983 PUM1Q14671 1186 aaKnown RBP eCLIP13.33□□□□□ -0.28
FANCA-232ENST00000568983 PABPC1LQ4VXU2 614 aaKnown RBP13.33□□□□□ -0.28
FANCA-232ENST00000568983 AXDND1Q5T1B0 1012 aaPredicted RBP13.33□□□□□ -0.28
FANCA-232ENST00000568983 MCPH1Q8NEM0 835 aa13.33□□□□□ -0.28
FANCA-232ENST00000568983 ING5Q8WYH8 240 aa13.33□□□□□ -0.28
FANCA-232ENST00000568983 HSD17B14Q9BPX1 270 aa13.33□□□□□ -0.28
FANCA-232ENST00000568983 CLSTN3Q9BQT9 956 aa13.33□□□□□ -0.28
FANCA-232ENST00000568983 C2orf40Q9H1Z8 148 aa13.33□□□□□ -0.28
FANCA-232ENST00000568983 COL4A3Q01955 1670 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 ZNF292O60281 2723 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 MED19A0JLT2 244 aaPredicted RBP13.32□□□□□ -0.28
FANCA-232ENST00000568983 PFKFB2O60825 505 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 PRKCBP05771 671 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 GLULP15104 373 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 HOXA9P31269 272 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 OR1D2P34982 312 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 PRKCQQ04759 706 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 CSTF1Q05048 431 aaKnown RBP13.32□□□□□ -0.28
FANCA-232ENST00000568983 MAPK6Q16659 721 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 SLC44A4Q53GD3 710 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 PPP4R3CPQ6ZMV5 832 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 NOSTRINQ8IVI9 506 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 DCLK2Q8N568 766 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 LNX1Q8TBB1 728 aaPredicted RBP13.32□□□□□ -0.28
FANCA-232ENST00000568983 ATRIPQ8WXE1 791 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 SECISBP2LQ93073 1101 aaKnown RBP13.32□□□□□ -0.28
FANCA-232ENST00000568983 PDZD7Q9H5P4 517 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 TPCN1Q9ULQ1 816 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 GDAQ9Y2T3 454 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 PATJQ8NI35 1801 aa13.32□□□□□ -0.28
FANCA-232ENST00000568983 DMXL1Q9Y485 3027 aa13.31□□□□□ -0.28
FANCA-232ENST00000568983 FAM170BA6NMN3 283 aa13.31□□□□□ -0.28
FANCA-232ENST00000568983 PTGESO14684 152 aa13.31□□□□□ -0.28
FANCA-232ENST00000568983 SPTLC1O15269 473 aa13.31□□□□□ -0.28
FANCA-232ENST00000568983 CD72P21854 359 aa13.31□□□□□ -0.28
FANCA-232ENST00000568983 ANKRD1Q15327 319 aa13.31□□□□□ -0.28
FANCA-232ENST00000568983 GLRA4Q5JXX5 417 aa13.31□□□□□ -0.28
FANCA-232ENST00000568983 CDCA2Q69YH5 1023 aaPredicted RBP13.31□□□□□ -0.28
FANCA-232ENST00000568983 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.31□□□□□ -0.28
FANCA-232ENST00000568983 TPRG1Q6ZUI0 275 aa13.31□□□□□ -0.28
FANCA-232ENST00000568983 DEPTORQ8TB45 409 aa13.31□□□□□ -0.28
FANCA-232ENST00000568983 ITFG1Q8TB96 612 aa13.31□□□□□ -0.28
FANCA-232ENST00000568983 HCFC1R1Q9NWW0 138 aa13.31□□□□□ -0.28
FANCA-232ENST00000568983 FBXO4Q9UKT5 387 aa13.31□□□□□ -0.28
FANCA-232ENST00000568983 MRPS23Q9Y3D9 190 aaKnown RBP13.31□□□□□ -0.28
FANCA-232ENST00000568983 CDY1Q9Y6F8 540 aa13.31□□□□□ -0.28
FANCA-232ENST00000568983 WDR87Q6ZQQ6 2873 aa13.31□□□□□ -0.28
FANCA-232ENST00000568983 FANCMQ8IYD8 2048 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 ARHGEF35A5YM69 484 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 NCAM2O15394 837 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 ADAM12O43184 909 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 TRAPPC3O43617 180 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 B3GAT3O94766 335 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 LRG1P02750 347 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 MAGEA9P43362 315 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 FAM187BQ17R55 369 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 UVSSAQ2YD98 709 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 ZNF528Q3MIS6 628 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 DCAF4L1Q3SXM0 396 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 ZBTB41Q5SVQ8 909 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 APBB1IPQ7Z5R6 666 aaPredicted RBP13.3□□□□□ -0.28
FANCA-232ENST00000568983 NPAS3Q8IXF0 933 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 DIS3L2Q8IYB7 885 aaKnown RBP13.3□□□□□ -0.28
FANCA-232ENST00000568983 ERMNQ8TAM6 284 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 FZD8Q9H461 694 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 LTB4R2Q9NPC1 389 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 PCDHGA2Q9Y5H1 932 aa13.3□□□□□ -0.28
FANCA-232ENST00000568983 EP300Q09472 2414 aaPredicted RBP13.3□□□□□ -0.28
FANCA-232ENST00000568983 VWA8A3KMH1 1905 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 CACNA1AO00555 2505 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 TTLL13PA6NNM8 815 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 BTBD18B2RXH4 712 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 PRRG1O14668 218 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 CTDNEP1O95476 244 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 XRCC6P12956 609 aaKnown RBP eCLIP13.29□□□□□ -0.28
FANCA-232ENST00000568983 ELF1P32519 619 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 MCM7P33993 719 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 RAB33AQ14088 237 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 PPP2R5AQ15172 486 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 RSPO4Q2I0M5 234 aaPredicted RBP13.29□□□□□ -0.28
FANCA-232ENST00000568983 VARS2Q5ST30 1063 aaKnown RBP13.29□□□□□ -0.28
FANCA-232ENST00000568983 RSPO2Q6UXX9 243 aaPredicted RBP13.29□□□□□ -0.28
FANCA-232ENST00000568983 MAML2Q8IZL2 1156 aaPredicted RBP13.29□□□□□ -0.28
FANCA-232ENST00000568983 NECAB1Q8N987 351 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 SUMF1Q8NBK3 374 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 TNFRSF25Q93038 417 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 MCRS1Q96EZ8 462 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 IFT74Q96LB3 600 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 NACC1Q96RE7 527 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 DDX23Q9BUQ8 820 aaKnown RBP13.29□□□□□ -0.28
FANCA-232ENST00000568983 OSBPL6Q9BZF3 934 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 TUFT1Q9NNX1 390 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 DNMT3BQ9UBC3 853 aaKnown RBP13.29□□□□□ -0.28
FANCA-232ENST00000568983 MTRRQ9UBK8 725 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 KCNH3Q9ULD8 1083 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 USP20Q9Y2K6 914 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 MRPS17Q9Y2R5 130 aaKnown RBP13.29□□□□□ -0.28
FANCA-232ENST00000568983 MTF2Q9Y483 593 aaPredicted RBP13.29□□□□□ -0.28
FANCA-232ENST00000568983 FRYLO94915 3013 aa13.29□□□□□ -0.28
FANCA-232ENST00000568983 DNAH14Q0VDD8 3507 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms