RNA–Protein interactions for RNA: ENST00000568494.1

ZNRF1-208, Transcript of zinc and ring finger 1, human

TSL 2

Gene ZNRF1, Length 2,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNRF1-208	ENST00000568494	MSTO1	Q9BUK6	570 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	UBXN6	Q9BZV1	441 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	PPME1	Q9Y570	386 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	ASB14	A6NK59	587 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	BUB1B	O60566	1050 aa	Predicted RBP	14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	SRGAP2C	P0DJJ0	459 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	TNNI1	P19237	187 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	MCM3	P25205	808 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	SLC7A5	Q01650	507 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CCDC70	Q6NSX1	233 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	ARMCX2	Q7L311	632 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	NT5DC3	Q86UY8	548 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	SYCE1	Q8N0S2	351 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	LRRC71	Q8N4P6	559 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	PBK	Q96KB5	322 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	ISCU	Q9H1K1	167 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	RBAK	Q9NYW8	714 aa	Predicted RBP	14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	SUCLA2	Q9P2R7	463 aa	Predicted RBP	14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	DMGDH	Q9UI17	866 aa	Known RBP	14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	COG5	Q9UP83	839 aa		14.31	□□□□□ -0.12
ZNRF1-208	ENST00000568494	PTPRJ	Q12913	1337 aa		14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	IGKV6-21	A0A0C4DH24	114 aa		14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CES2	O00748	559 aa		14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	HLA-DRA	P01903	254 aa		14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	MME	P08473	750 aa		14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	HARS	P12081	509 aa	Known RBP	14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CYP11B1	P15538	503 aa		14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	FMO1	Q01740	532 aa		14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	LAMTOR4	Q0VGL1	99 aa		14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	TTLL4	Q14679	1199 aa		14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	TAF1C	Q15572	869 aa	Predicted RBP	14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	ZNF792	Q3KQV3	632 aa		14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	SEZ6	Q53EL9	994 aa		14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	TDRD10	Q5VZ19	366 aa	Known RBP	14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	METTL13	Q8N6R0	699 aa		14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	GTF3C2	Q8WUA4	911 aa	Predicted RBP	14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	TRAPPC12	Q8WVT3	735 aa		14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	ADGRA2	Q96PE1	1338 aa		14.3	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CEP104	O60308	925 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	ZC3H11A	O75152	810 aa	Known RBP eCLIP	14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	RTN2	O75298	545 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	VNN1	O95497	513 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	LDHA	P00338	332 aa	Known RBP	14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	MYBL2	P10244	700 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CRHR2	Q13324	411 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	ZACN	Q401N2	412 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	GSPT2	Q8IYD1	628 aa	Known RBP	14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	TCP11	Q8WWU5	503 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	ZBTB10	Q96DT7	871 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CCDC113	Q9H0I3	377 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	SMARCAD1	Q9H4L7	1026 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	AMFR	Q9UKV5	643 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	DIS3	Q9Y2L1	958 aa	Known RBP	14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	THSD7B	Q9C0I4	1608 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CNTNAP2	Q9UHC6	1331 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	LOC102724159	A0A0B4J2E5	919 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CALCA	P01258	141 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	KRT5	P13647	590 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CCNA1	P78396	465 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	BIRC3	Q13489	604 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	SMC1A	Q14683	1233 aa	Known RBP	14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CASP8	Q14790	479 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	PWP2	Q15269	919 aa	Known RBP	14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CDCA2	Q69YH5	1023 aa	Predicted RBP	14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	TAPT1	Q6NXT6	567 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	ZBTB33	Q86T24	672 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	REM2	Q8IYK8	340 aa	Predicted RBP	14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	USP38	Q8NB14	1042 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	RNF149	Q8NC42	400 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	SCFD2	Q8WU76	684 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	HES6	Q96HZ4	224 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	PARK7	Q99497	189 aa	Known RBP	14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	ZCCHC17	Q9NP64	241 aa	Known RBP	14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	TRPC6	Q9Y210	931 aa		14.29	□□□□□ -0.12
ZNRF1-208	ENST00000568494	MSC	O60682	206 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	TRPA1	O75762	1119 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	ADORA2A	P29274	412 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	PIK3CA	P42336	1068 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	EFNA5	P52803	228 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	GPC5	P78333	572 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CDR2	Q01850	454 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	GCNT1	Q02742	428 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	WDR44	Q5JSH3	913 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	GJC2	Q5T442	439 aa	Predicted RBP	14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	SPOPL	Q6IQ16	392 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	ZPBP2	Q6X784	338 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	DDX1	Q92499	740 aa	Known RBP	14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	ZBTB9	Q96C00	473 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	ZNF668	Q96K58	619 aa	Predicted RBP	14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CGRRF1	Q99675	332 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	SELENOO	Q9BVL4	669 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	MRPL4	Q9BYD3	311 aa	Known RBP	14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	C1orf112	Q9NSG2	853 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CPA4	Q9UI42	421 aa		14.28	□□□□□ -0.12
ZNRF1-208	ENST00000568494	DDX3Y	O15523	660 aa	Known RBP	14.27	□□□□□ -0.12
ZNRF1-208	ENST00000568494	CLDN3	O15551	220 aa		14.27	□□□□□ -0.12
ZNRF1-208	ENST00000568494	GAS2	O43903	313 aa	Known RBP	14.27	□□□□□ -0.12
ZNRF1-208	ENST00000568494	PRKCB	P05771	671 aa		14.27	□□□□□ -0.12
ZNRF1-208	ENST00000568494	GJB1	P08034	283 aa		14.27	□□□□□ -0.12
ZNRF1-208	ENST00000568494	GZMA	P12544	262 aa		14.27	□□□□□ -0.12

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms