RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 HOXA13P31271 388 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-250ENST00000568290 GBP2P32456 591 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-250ENST00000568290 HOXD13P35453 343 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 COILP38432 576 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-250ENST00000568290 MMP13P45452 471 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 NSFP46459 744 aaKnown RBP8.17□□□□□ -1.1
ATXN3-250ENST00000568290 CASP4P49662 377 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 PLTPP55058 493 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 NCKAP1LP55160 1127 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 POU5F1Q01860 360 aaKnown RBP8.17□□□□□ -1.1
ATXN3-250ENST00000568290 STRN3Q13033 797 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 MTMR1Q13613 665 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 TKFCQ3LXA3 575 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 GNPTABQ3T906 1256 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 SGO2Q562F6 1265 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 B3GNT9Q6UX72 402 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 ZNF365Q70YC5 407 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 PCGF5Q86SE9 256 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 LDHDQ86WU2 507 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 SLC13A5Q86YT5 568 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-250ENST00000568290 PPM1KQ8N3J5 372 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 LARGE2Q8N3Y3 721 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 MTMR14Q8NCE2 650 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 AGBL3Q8NEM8 1001 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 LNX1Q8TBB1 728 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-250ENST00000568290 ATXN2LQ8WWM7 1075 aaKnown RBP8.17□□□□□ -1.1
ATXN3-250ENST00000568290 SHC3Q92529 594 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 ZNF653Q96CK0 615 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 GPRASP2Q96D09 838 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 SNF8Q96H20 258 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 RBM41Q96IZ5 413 aaKnown RBP8.17□□□□□ -1.1
ATXN3-250ENST00000568290 SEC16BQ96JE7 1060 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 SCLT1Q96NL6 688 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 XPO6Q96QU8 1125 aaKnown RBP8.17□□□□□ -1.1
ATXN3-250ENST00000568290 FNBP1Q96RU3 617 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 MPHOSPH6Q99547 160 aaKnown RBP8.17□□□□□ -1.1
ATXN3-250ENST00000568290 SELENOSQ9BQE4 189 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 SENP7Q9BQF6 1050 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 SYT11Q9BT88 431 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 TRAIPQ9BWF2 469 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 FGFBP2Q9BYJ0 223 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 THAP2Q9H0W7 228 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 DPH5Q9H2P9 285 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 UNC45AQ9H3U1 944 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 DNAJC18Q9H819 358 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 DBNDD1Q9H9R9 158 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 AS3MTQ9HBK9 375 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 KLC4Q9NSK0 619 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 LRRC4BQ9NT99 713 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 SMARCAL1Q9NZC9 954 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 EHD2Q9NZN4 543 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 ZBTB21Q9ULJ3 1066 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 PCDHB2Q9Y5E7 798 aa8.17□□□□□ -1.1
ATXN3-250ENST00000568290 RSPH10B2B2RC85 870 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 FOXN3O00409 490 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-250ENST00000568290 OPLAHO14841 1288 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 FSCN2O14926 492 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 CDH16O75309 829 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 PSAPP07602 524 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 MMEP08473 750 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 RSPH10BP0C881 870 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 ATF2P15336 505 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 CCND2P30279 289 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 HNRNPH1P31943 449 aaKnown RBP8.16□□□□□ -1.1
ATXN3-250ENST00000568290 YWHABP31946 246 aaKnown RBP8.16□□□□□ -1.1
ATXN3-250ENST00000568290 NF2P35240 595 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 RARRES1P49788 294 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 AFF2P51816 1311 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 OAZ1P54368 228 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 COPS2P61201 443 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 IL9RQ01113 521 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 RNASELQ05823 741 aaKnown RBP8.16□□□□□ -1.1
ATXN3-250ENST00000568290 MESDQ14696 234 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 SNRNP35Q16560 246 aaKnown RBP8.16□□□□□ -1.1
ATXN3-250ENST00000568290 SKIDA1Q1XH10 827 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 RSBN1LQ6PCB5 846 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-250ENST00000568290 FOXR1Q6PIV2 292 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 C6orf89Q6UWU4 347 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 CRELD2Q6UXH1 353 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-250ENST00000568290 RNF207Q6ZRF8 634 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 CLEC10AQ8IUN9 316 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 MAP4K3Q8IVH8 894 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 RHOT1Q8IXI2 618 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 RPTORQ8N122 1335 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 SH2D3CQ8N5H7 860 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 KCNN1Q92952 543 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 ART4Q93070 314 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 SGSM3Q96HU1 749 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 CFAP57Q96MR6 1250 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 RAB3IPQ96QF0 476 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-250ENST00000568290 NTPCRQ9BSD7 190 aaKnown RBP8.16□□□□□ -1.1
ATXN3-250ENST00000568290 TUBB6Q9BUF5 446 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 BEGAINQ9BUH8 593 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 NUP85Q9BW27 656 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 TXLNGYQ9BZA5 131 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 KMT5AQ9NQR1 393 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 RAB20Q9NX57 234 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 ZMYM2Q9UBW7 1377 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 IGSF9BQ9UPX0 1349 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 CEP83Q9Y592 693 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms