RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 FZD8Q9H461 694 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 SALL4Q9UJQ4 1053 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 GABRQQ9UN88 632 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 DDX3XO00571 662 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMG1-215ENST00000568239 ZEB2O60315 1214 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 HLA-DRAP01903 254 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 SMIM10L2AP0DMW4 78 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 SMIM10L2BP0DMW5 78 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 ABCB4P21439 1286 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 FGFR4P22455 802 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 FLT3LGP49771 235 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 CPT1AP50416 773 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 HSP90AA2PQ14568 343 aaPredicted RBP7.62□□□□□ -1.19
SMG1-215ENST00000568239 BMS1Q14692 1282 aaKnown RBP7.62□□□□□ -1.19
SMG1-215ENST00000568239 MARCH8Q5T0T0 291 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 FMNL3Q8IVF7 1028 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 TRIM58Q8NG06 486 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 SLC20A1Q8WUM9 679 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 USP6NLQ92738 828 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 ERO1AQ96HE7 468 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 KREMEN1Q96MU8 473 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 NOX5Q96PH1 765 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 PSMB7Q99436 277 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 PRMT7Q9NVM4 692 aaPredicted RBP7.62□□□□□ -1.19
SMG1-215ENST00000568239 COQ4Q9Y3A0 265 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 COL1A2P08123 1366 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 TRIP12Q14669 1992 aaPredicted RBP7.62□□□□□ -1.19
SMG1-215ENST00000568239 CTIFO43310 598 aaKnown RBP7.62□□□□□ -1.19
SMG1-215ENST00000568239 SRGAP2O75044 1071 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 LACTBP83111 547 aaPredicted RBP7.62□□□□□ -1.19
SMG1-215ENST00000568239 MCL1Q07820 350 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 MFSD10Q14728 455 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 NAB2Q15742 525 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 ERCC6LQ2NKX8 1250 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 ZACNQ401N2 412 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 ZNF662Q6ZS27 426 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 TSHZ1Q6ZSZ6 1077 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 SLC47A2Q86VL8 602 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 KIAA0319LQ8IZA0 1049 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 LNX1Q8TBB1 728 aaPredicted RBP7.62□□□□□ -1.19
SMG1-215ENST00000568239 HELQQ8TDG4 1101 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 UBXN4Q92575 508 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 CAPZA3Q96KX2 299 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 ARID3AQ99856 593 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 IMPG2Q9BZV3 1241 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 MTMR12Q9C0I1 747 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 NRCAMQ92823 1304 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 RRN3P2A6NIE6 340 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 PMM2O15305 246 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 TOMM70O94826 608 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 SGPL1O95470 568 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 ALDH1A1P00352 501 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 PGK1P00558 417 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 F2P00734 622 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 C4BPAP04003 597 aaKnown RBP7.61□□□□□ -1.19
SMG1-215ENST00000568239 KRT19P08727 400 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 H2AFZP0C0S5 128 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 TMEM191BP0C7N4 346 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 CXCL8P10145 99 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 CYP2C9P11712 490 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 AKR1A1P14550 325 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 ZNF200P98182 395 aaPredicted RBP7.61□□□□□ -1.19
SMG1-215ENST00000568239 PRKCZQ05513 592 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 NOGQ13253 232 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 ELF2Q15723 593 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 FSCN1Q16658 493 aaKnown RBP7.61□□□□□ -1.19
SMG1-215ENST00000568239 PTPROQ16827 1216 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 DEFB115Q30KQ5 88 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 GNASQ5JWF2 1037 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 MFSD14CQ5VZR4 134 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 H2AFVQ71UI9 128 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 BRSK2Q8IWQ3 736 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 TMEM192Q8IY95 271 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 RPUSD2Q8IZ73 545 aaKnown RBP7.61□□□□□ -1.19
SMG1-215ENST00000568239 KAT2BQ92831 832 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 KCNN1Q92952 543 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 CAPNS2Q96L46 248 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 CGRRF1Q99675 332 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 AGPAT1Q99943 283 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 CDT1Q9H211 546 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 RPF1Q9H9Y2 349 aaKnown RBP7.61□□□□□ -1.19
SMG1-215ENST00000568239 CDC23Q9UJX2 597 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 SAR1BQ9Y6B6 198 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 CNTNAP2Q9UHC6 1331 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 SIP14410 1827 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 PJA2O43164 708 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 CALCAP01258 141 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 HOXD8P13378 290 aaPredicted RBP7.61□□□□□ -1.19
SMG1-215ENST00000568239 ARF4P18085 180 aaPredicted RBP7.61□□□□□ -1.19
SMG1-215ENST00000568239 PSEN2P49810 448 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 TRPC3Q13507 836 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 NCOA4Q13772 614 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 TEX35Q5T0J7 233 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 PALB2Q86YC2 1186 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 C7orf31Q8N865 590 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 CAGE1Q8TC20 777 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 DNAJB3Q8WWF6 145 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 TRIB2Q92519 343 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 OSMRQ99650 979 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 CPSF3Q9UKF6 684 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms