RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 MYBBP1AQ9BQG0 1328 aaKnown RBP5.13□□□□□ -1.59
HERPUD1-212ENST00000567944 B5MCH6 92 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 C1QTNF3-AMACRE9PGA6 284 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 MUSKO15146 869 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 SGTAO43765 313 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 SCGB1D2O95969 90 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 IL2RBP14784 551 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 DDCP20711 480 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 AKAP5P24588 427 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 ACRV1P26436 265 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 CDC42EP1Q00587 391 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 HHEXQ03014 270 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 RRP1BQ14684 758 aaKnown RBP5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 HS1BP3Q53T59 392 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 DCAF17Q5H9S7 520 aaPredicted RBP5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 SPDYAQ5MJ70 313 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 METRNLQ641Q3 311 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 B3GNT9Q6UX72 402 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 EPM2AIP1Q7L775 607 aaPredicted RBP5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 MIER2Q8N344 545 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 ATXN2LQ8WWM7 1075 aaKnown RBP5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 MNTQ99583 582 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 MANSC1Q9H8J5 431 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 ANLNQ9NQW6 1124 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 XDHP47989 1333 aa5.12□□□□□ -1.59
HERPUD1-212ENST00000567944 PJA2O43164 708 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 MFAP3LO75121 409 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 GPR32O75388 356 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 IPO13O94829 963 aaKnown RBP5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 LPOP22079 712 aaPredicted RBP5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 ZNF280AP59817 542 aaPredicted RBP5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 ZNF267Q14586 743 aaPredicted RBP5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 VPS72Q15906 364 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 ATAT1Q5SQI0 421 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 DRICH1Q6PGQ1 229 aaPredicted RBP5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 SEM1Q6ZVN7 128 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 MIGA2Q7L4E1 593 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 RNF169Q8NCN4 708 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 HPS3Q969F9 1004 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 PGBD4Q96DM1 585 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 NEU1Q99519 415 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 MRI1Q9BV20 369 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 GPR87Q9BY21 358 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 EPC1Q9H2F5 836 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 TDP1Q9NUW8 608 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 TMEM140Q9NV12 185 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 FAM30AQ9NZY2 134 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 CEP72Q9P209 647 aa5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 PNMA8BQ9ULN7 279 aaPredicted RBP5.11□□□□□ -1.59
HERPUD1-212ENST00000567944 LRRC14BA6NHZ5 514 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 LEFTY2O00292 366 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 TSPAN6O43657 245 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 ADRB1P08588 477 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 SLC6A4P31645 630 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 MAN2A2P49641 1150 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 CLRN1P58418 232 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 CTXN1P60606 82 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 SLC25A3Q00325 362 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 TLE1Q04724 770 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 TOB2Q14106 344 aaPredicted RBP5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 PLXDC1Q8IUK5 500 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 GSPT2Q8IYD1 628 aaKnown RBP5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 TSR2Q969E8 191 aaKnown RBP5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 TMX3Q96JJ7 454 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 CLPTM1LQ96KA5 538 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 TMPRSS5Q9H3S3 457 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 FBXO34Q9NWN3 711 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 MOCS1Q9NZB8 636 aa5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 RUVBL1Q9Y265 456 aaKnown RBP5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 CFAP20Q9Y6A4 193 aaKnown RBP5.1□□□□□ -1.59
HERPUD1-212ENST00000567944 PRR5-ARHGAP8B1AHC4 643 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 NT5C1B-RDH14C9J2C7 533 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 CYP27B1O15528 508 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 SNRPA1P09661 255 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 SBK3P0C264 359 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 RAP2AP10114 183 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 HSP90B1P14625 803 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 ATP5JP18859 108 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 CYP2C19P33261 490 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 PPP2R5AQ15172 486 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 USP39Q53GS9 565 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 DACT2Q5SW24 774 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 FAM102BQ5T8I3 360 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 SPRED1Q7Z699 444 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 TMPRSS6Q8IU80 811 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 CHPFQ8IZ52 775 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 OR10H5Q8NGA6 315 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 TFAP2CQ92754 450 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 MVB12AQ96EY5 273 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 AIFM3Q96NN9 605 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 CDK5RAP1Q96SZ6 601 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 NDC1Q9BTX1 674 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 ZNF703Q9H7S9 590 aaPredicted RBP5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 SPON1Q9HCB6 807 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 NOB1Q9ULX3 412 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 HDAC5Q9UQL6 1122 aa5.09□□□□□ -1.59
HERPUD1-212ENST00000567944 TCRBV7S2A1N4TA0A589 114 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 DRGXA6NNA5 263 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 AHRRA9YTQ3 701 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms