RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 PCDHGA5Q9Y5G8 931 aa15.4■□□□□ 0.06
SMG1-213ENST00000567737 IGF2RP11717 2491 aa15.4■□□□□ 0.06
SMG1-213ENST00000567737 TMEM150BA6NC51 233 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 SH2B2O14492 632 aaPredicted RBP15.39■□□□□ 0.05
SMG1-213ENST00000567737 ERLIN2O94905 339 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 TOP3BO95985 862 aaKnown RBP15.39■□□□□ 0.05
SMG1-213ENST00000567737 RHOP08100 348 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 CEBPBP17676 345 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 GDI1P31150 447 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 HOXA6P31267 233 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 MPLP40238 635 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 RAP1GAPP47736 663 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 PLA2G2CQ5R387 149 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 DAB2IPQ5VWQ8 1189 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 C1orf228Q6PIY5 440 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 MAP4K3Q8IVH8 894 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 PLEKHM2Q8IWE5 1019 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 HACE1Q8IYU2 909 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 LNX1Q8TBB1 728 aaPredicted RBP15.39■□□□□ 0.05
SMG1-213ENST00000567737 MSANTD3Q96H12 275 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 TMEM87BQ96K49 555 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 CEP89Q96ST8 783 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 EDEM2Q9BV94 578 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 APOL6Q9BWW8 343 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 GIT1Q9Y2X7 761 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 COL4A3BPQ9Y5P4 624 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 CNTNAP5Q8WYK1 1306 aa15.39■□□□□ 0.05
SMG1-213ENST00000567737 GAS7O60861 476 aa15.38■□□□□ 0.05
SMG1-213ENST00000567737 RPP40O75818 363 aaKnown RBP15.38■□□□□ 0.05
SMG1-213ENST00000567737 PSMC3P17980 439 aa15.38■□□□□ 0.05
SMG1-213ENST00000567737 FCARP24071 287 aa15.38■□□□□ 0.05
SMG1-213ENST00000567737 FOXK1P85037 733 aa15.38■□□□□ 0.05
SMG1-213ENST00000567737 PTH1RQ03431 593 aa15.38■□□□□ 0.05
SMG1-213ENST00000567737 HSP90AA2PQ14568 343 aaPredicted RBP15.38■□□□□ 0.05
SMG1-213ENST00000567737 SLC5A9Q2M3M2 681 aa15.38■□□□□ 0.05
SMG1-213ENST00000567737 SH3PXD2AQ5TCZ1 1133 aa15.38■□□□□ 0.05
SMG1-213ENST00000567737 PDXDC1Q6P996 788 aa15.38■□□□□ 0.05
SMG1-213ENST00000567737 RTL10Q7L3V2 364 aa15.38■□□□□ 0.05
SMG1-213ENST00000567737 GAB3Q8WWW8 586 aa15.38■□□□□ 0.05
SMG1-213ENST00000567737 RABGGTAQ92696 567 aa15.38■□□□□ 0.05
SMG1-213ENST00000567737 EIF2AQ9BY44 585 aaKnown RBP15.38■□□□□ 0.05
SMG1-213ENST00000567737 RBM12Q9NTZ6 932 aaKnown RBP15.38■□□□□ 0.05
SMG1-213ENST00000567737 BARHL2Q9NY43 387 aa15.38■□□□□ 0.05
SMG1-213ENST00000567737 HES2Q9Y543 173 aa15.38■□□□□ 0.05
SMG1-213ENST00000567737 SRGAP2CP0DJJ0 459 aa15.37■□□□□ 0.05
SMG1-213ENST00000567737 CCDC192P0DO97 292 aa15.37■□□□□ 0.05
SMG1-213ENST00000567737 MCM5P33992 734 aa15.37■□□□□ 0.05
SMG1-213ENST00000567737 GRIK3Q13003 919 aa15.37■□□□□ 0.05
SMG1-213ENST00000567737 HDAC1Q13547 482 aaPredicted RBP15.37■□□□□ 0.05
SMG1-213ENST00000567737 RAB33AQ14088 237 aa15.37■□□□□ 0.05
SMG1-213ENST00000567737 SOWAHCQ53LP3 525 aaPredicted RBP15.37■□□□□ 0.05
SMG1-213ENST00000567737 FAM171A1Q5VUB5 890 aa15.37■□□□□ 0.05
SMG1-213ENST00000567737 KBTBD6Q86V97 674 aa15.37■□□□□ 0.05
SMG1-213ENST00000567737 MICU3Q86XE3 530 aa15.37■□□□□ 0.05
SMG1-213ENST00000567737 HASPINQ8TF76 798 aa15.37■□□□□ 0.05
SMG1-213ENST00000567737 DEPDC1BQ8WUY9 529 aa15.37■□□□□ 0.05
SMG1-213ENST00000567737 TEKT3Q9BXF9 490 aa15.37■□□□□ 0.05
SMG1-213ENST00000567737 TRIM6Q9C030 488 aaPredicted RBP15.37■□□□□ 0.05
SMG1-213ENST00000567737 MINDY3Q9H8M7 445 aa15.37■□□□□ 0.05
SMG1-213ENST00000567737 AVENQ9NQS1 362 aaPredicted RBP15.37■□□□□ 0.05
SMG1-213ENST00000567737 F5P12259 2224 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 C4orf47A7E2U8 309 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 DDX11L8A8MPP1 907 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 ZNF263O14978 683 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 ADAM12O43184 909 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 CEACAM1P13688 526 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 PTPN2P17706 415 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 AXLP30530 894 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 CIITAP33076 1130 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 LIFRP42702 1097 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 NCBP1Q09161 790 aaKnown RBP15.36■□□□□ 0.05
SMG1-213ENST00000567737 FAM78AQ5JUQ0 283 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 DGKKQ5KSL6 1271 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 PPP1R15BQ5SWA1 713 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 LRCH2Q5VUJ6 765 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 NOTUMQ6P988 496 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 Q6ZS52 159 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 MIER3Q7Z3K6 550 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 RDM1Q8NG50 284 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 CSGALNACT1Q8TDX6 532 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 CCDC51Q96ER9 411 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 RIT2Q99578 217 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 UNC45AQ9H3U1 944 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 RBM28Q9NW13 759 aaKnown RBP15.36■□□□□ 0.05
SMG1-213ENST00000567737 ANKFY1Q9P2R3 1169 aa15.36■□□□□ 0.05
SMG1-213ENST00000567737 V9GY48 417 aaPredicted RBP15.36■□□□□ 0.05
SMG1-213ENST00000567737 TDRD15B5MCY1 1934 aaKnown RBP15.35■□□□□ 0.05
SMG1-213ENST00000567737 ZNF197O14709 1029 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 MSH4O15457 936 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 STBD1O95210 358 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 LRG1P02750 347 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 OR1D2P34982 312 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 MLLT6P55198 1093 aaPredicted RBP15.35■□□□□ 0.05
SMG1-213ENST00000567737 ELAVL2Q12926 359 aaKnown RBP15.35■□□□□ 0.05
SMG1-213ENST00000567737 DSG2Q14126 1118 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 TCEAL6Q6IPX3 200 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 B4GALNT3Q6L9W6 998 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 VITQ6UXI7 678 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 SYNE3Q6ZMZ3 975 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 PRPF31Q8WWY3 499 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms