RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 LILRA6Q6PI73 481 aa20.45■□□□□ 0.86
LINC01238-205ENST00000567549 DCLRE1AQ6PJP8 1040 aa20.45■□□□□ 0.86
LINC01238-205ENST00000567549 GLYCTKQ8IVS8 523 aa20.45■□□□□ 0.86
LINC01238-205ENST00000567549 FLCNQ8NFG4 579 aa20.45■□□□□ 0.86
LINC01238-205ENST00000567549 BSNDQ8WZ55 320 aa20.45■□□□□ 0.86
LINC01238-205ENST00000567549 DDX27Q96GQ7 796 aaKnown RBP20.45■□□□□ 0.86
LINC01238-205ENST00000567549 MRPL4Q9BYD3 311 aaKnown RBP20.45■□□□□ 0.86
LINC01238-205ENST00000567549 TMEM134Q9H6X4 195 aa20.45■□□□□ 0.86
LINC01238-205ENST00000567549 GDAQ9Y2T3 454 aa20.45■□□□□ 0.86
LINC01238-205ENST00000567549 PTGESO14684 152 aa20.44■□□□□ 0.86
LINC01238-205ENST00000567549 RFPL2O75678 378 aa20.44■□□□□ 0.86
LINC01238-205ENST00000567549 KIF4AO95239 1232 aa20.44■□□□□ 0.86
LINC01238-205ENST00000567549 SEC24BO95487 1268 aa20.44■□□□□ 0.86
LINC01238-205ENST00000567549 PDGFBP01127 241 aaPredicted RBP20.44■□□□□ 0.86
LINC01238-205ENST00000567549 SMTNP53814 917 aa20.44■□□□□ 0.86
LINC01238-205ENST00000567549 STRN3Q13033 797 aa20.44■□□□□ 0.86
LINC01238-205ENST00000567549 ANKS3Q6ZW76 656 aa20.44■□□□□ 0.86
LINC01238-205ENST00000567549 CDK5RAP3Q96JB5 506 aa20.44■□□□□ 0.86
LINC01238-205ENST00000567549 FBXW11Q9UKB1 542 aa20.44■□□□□ 0.86
LINC01238-205ENST00000567549 F8W810 466 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 H0YCG3 227 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 STK25O00506 426 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 B3GAT3O94766 335 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 SPATA31D3P0C874 917 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 SRFP11831 508 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 AOC1P19801 751 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 ZNF568Q3ZCX4 644 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 RTP2Q5QGT7 225 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 SPATA31D4Q6ZUB0 917 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 HASPINQ8TF76 798 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 ZNF707Q96C28 371 aaPredicted RBP20.43■□□□□ 0.86
LINC01238-205ENST00000567549 B3GALT6Q96L58 329 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 TCHPQ9BT92 498 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 KMT5AQ9NQR1 393 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 KCND2Q9NZV8 630 aa20.43■□□□□ 0.86
LINC01238-205ENST00000567549 CACNA1HO95180 2353 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 H0Y858 1186 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 H3BQV1 296 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 GFRA3O60609 400 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 POU2F2P09086 479 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 LAMP2P13473 410 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 SCP2P22307 547 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 FSHRP23945 695 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 GRM5P41594 1212 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 PEX3P56589 373 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 MCTP1Q6DN14 999 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 PRSS55Q6UWB4 352 aaPredicted RBP20.42■□□□□ 0.86
LINC01238-205ENST00000567549 MTSS1LQ765P7 747 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 GET4Q7L5D6 327 aaPredicted RBP20.42■□□□□ 0.86
LINC01238-205ENST00000567549 SIX5Q8N196 739 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 C4orf32Q8N8J7 132 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 TMEM105Q8N8V8 129 aa20.42■□□□□ 0.86
LINC01238-205ENST00000567549 C8AP07357 584 aa20.41■□□□□ 0.86
LINC01238-205ENST00000567549 RPL17P18621 184 aaKnown RBP20.41■□□□□ 0.86
LINC01238-205ENST00000567549 MCM2P49736 904 aa20.41■□□□□ 0.86
LINC01238-205ENST00000567549 LNX1Q8TBB1 728 aaPredicted RBP20.41■□□□□ 0.86
LINC01238-205ENST00000567549 RABGGTAQ92696 567 aa20.41■□□□□ 0.86
LINC01238-205ENST00000567549 SHDQ96IW2 340 aa20.41■□□□□ 0.86
LINC01238-205ENST00000567549 CLSTN3Q9BQT9 956 aa20.41■□□□□ 0.86
LINC01238-205ENST00000567549 PCDHB6Q9Y5E3 794 aa20.41■□□□□ 0.86
LINC01238-205ENST00000567549 PROB1E7EW31 1015 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 SLC26A4O43511 780 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 HIP1RO75146 1068 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 MCF2P10911 925 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 FGFR3P22607 806 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 NPTX2P47972 431 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 RAB33AQ14088 237 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 NAB2Q15742 525 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 EEF1DP3Q658K8 133 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 SLC44A3Q8N4M1 653 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 ACAP3Q96P50 834 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 PPP1R10Q96QC0 940 aaKnown RBP20.4■□□□□ 0.86
LINC01238-205ENST00000567549 PAAF1Q9BRP4 392 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 KIFC3Q9BVG8 833 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 SMOC2Q9H3U7 446 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 BACE2Q9Y5Z0 518 aa20.4■□□□□ 0.86
LINC01238-205ENST00000567549 TTLL13PA6NNM8 815 aa20.39■□□□□ 0.85
LINC01238-205ENST00000567549 H7C4K7 107 aa20.39■□□□□ 0.85
LINC01238-205ENST00000567549 GUCY2CP25092 1073 aa20.39■□□□□ 0.85
LINC01238-205ENST00000567549 ELF1P32519 619 aa20.39■□□□□ 0.85
LINC01238-205ENST00000567549 RPL9P32969 192 aaKnown RBP20.39■□□□□ 0.85
LINC01238-205ENST00000567549 ABCD1P33897 745 aa20.39■□□□□ 0.85
LINC01238-205ENST00000567549 NT5DC1Q5TFE4 455 aa20.39■□□□□ 0.85
LINC01238-205ENST00000567549 ARL6IP4Q66PJ3 421 aaKnown RBP20.39■□□□□ 0.85
LINC01238-205ENST00000567549 MPZL3Q6UWV2 235 aa20.39■□□□□ 0.85
LINC01238-205ENST00000567549 CCDC105Q8IYK2 499 aa20.39■□□□□ 0.85
LINC01238-205ENST00000567549 MYADMQ96S97 322 aa20.39■□□□□ 0.85
LINC01238-205ENST00000567549 ACO2Q99798 780 aaKnown RBP20.39■□□□□ 0.85
LINC01238-205ENST00000567549 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.39■□□□□ 0.85
LINC01238-205ENST00000567549 LARSQ9P2J5 1176 aaKnown RBP20.39■□□□□ 0.85
LINC01238-205ENST00000567549 ARHGAP28Q9P2N2 729 aa20.39■□□□□ 0.85
LINC01238-205ENST00000567549 MTRRQ9UBK8 725 aa20.39■□□□□ 0.85
LINC01238-205ENST00000567549 CDH7Q9ULB5 785 aa20.39■□□□□ 0.85
LINC01238-205ENST00000567549 POLIQ9UNA4 740 aa20.39■□□□□ 0.85
LINC01238-205ENST00000567549 DOCK8Q8NF50 2099 aa20.39■□□□□ 0.85
LINC01238-205ENST00000567549 CITO14578 2027 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 SMIM28A0A1B0GU29 152 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 E9PMD0 336 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 N4BP1O75113 896 aaKnown RBP20.38■□□□□ 0.85
LINC01238-205ENST00000567549 BMP15O95972 392 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms